Variant report

Variant rs793468
Chromosome Location chr3:99538346-99538347
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:99536800-99538400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr3:99537200-99538400 Flanking Active TSS GM12878-XiMat blood
3 chr3:99537200-99542400 Weak transcription Small Intestine intestine
4 chr3:99537200-99562600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr3:99537200-99594400 Weak transcription Esophagus oesophagus
6 chr3:99537400-99538400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
7 chr3:99537400-99538400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
8 chr3:99537400-99538400 Enhancers Primary mononuclear cells fromperipheralblood Blood
9 chr3:99537400-99538400 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr3:99537400-99544200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr3:99537400-99551000 Weak transcription Fetal Muscle Trunk muscle
12 chr3:99537400-99552400 Weak transcription Ovary ovary
13 chr3:99537600-99538400 Enhancers Primary B cells from cord blood blood
14 chr3:99537600-99538400 Enhancers Primary T helper cells fromperipheralblood blood
15 chr3:99537600-99538400 Enhancers Primary T killer memory cells from peripheral blood blood
16 chr3:99537600-99538400 Enhancers Adipose Nuclei Adipose
17 chr3:99537800-99538400 Enhancers HUVEC blood vessel
18 chr3:99537800-99538600 Enhancers Primary T killer naive cells fromperipheralblood blood
19 chr3:99537800-99540200 Weak transcription Fetal Thymus thymus
20 chr3:99537800-99541000 Weak transcription iPS-18 Cell Line embryonic stem cell
21 chr3:99537800-99541000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr3:99537800-99542200 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr3:99537800-99542200 Weak transcription Stomach Mucosa stomach
24 chr3:99537800-99542400 Weak transcription Placenta Placenta
25 chr3:99537800-99542600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr3:99537800-99543400 Weak transcription Fetal Kidney kidney
27 chr3:99537800-99543600 Weak transcription HSMMtube muscle
28 chr3:99537800-99544400 Weak transcription Placenta Amnion Placenta Amnion
29 chr3:99537800-99547600 Weak transcription Aorta Aorta
30 chr3:99537800-99548200 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr3:99537800-99552400 Weak transcription Pancreas Pancrea
32 chr3:99537800-99561800 Weak transcription Stomach Smooth Muscle stomach
33 chr3:99537800-99562400 Weak transcription Left Ventricle heart
34 chr3:99538000-99538400 Active TSS Primary hematopoietic stem cells blood
35 chr3:99538000-99538400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr3:99538000-99538400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr3:99538000-99538400 Enhancers Skeletal Muscle Female skeletal muscle
38 chr3:99538000-99538400 Enhancers Hela-S3 cervix
39 chr3:99538000-99538400 Enhancers NHEK skin
40 chr3:99538000-99538600 Enhancers Dnd41 blood
41 chr3:99538000-99539200 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr3:99538000-99539400 Weak transcription Brain Germinal Matrix brain
43 chr3:99538000-99539400 Weak transcription Fetal Brain Female brain
44 chr3:99538000-99541600 Weak transcription Brain Cingulate Gyrus brain
45 chr3:99538000-99542600 Weak transcription Psoas Muscle Psoas
46 chr3:99538000-99543200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr3:99538000-99543200 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr3:99538000-99543200 Weak transcription Liver Liver
49 chr3:99538000-99543600 Weak transcription Muscle Satellite Cultured Cells --
50 chr3:99538000-99543600 Weak transcription NHLF lung

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