Variant report

Variant rs16921801
Chromosome Location chr9:649616-649617
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:616800-655800 Weak transcription Pancreas Pancrea
2 chr9:635000-650400 Weak transcription Fetal Intestine Small intestine
3 chr9:635200-649800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr9:643200-650400 Weak transcription HSMMtube muscle
5 chr9:646400-652800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr9:648200-651600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr9:648400-649800 Enhancers HUES64 Cell Line embryonic stem cell
8 chr9:648600-650000 Enhancers Cortex derived primary cultured neurospheres brain
9 chr9:648600-650800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr9:648600-650800 Enhancers Esophagus oesophagus
11 chr9:648600-651600 Enhancers ES-I3 Cell Line embryonic stem cell
12 chr9:648600-651600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr9:648600-651600 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr9:648600-651800 Enhancers H1 Cell Line embryonic stem cell
15 chr9:648800-649800 Weak transcription Fetal Thymus thymus
16 chr9:648800-650000 Enhancers iPS-18 Cell Line embryonic stem cell
17 chr9:648800-650400 Enhancers Brain Hippocampus Middle brain
18 chr9:648800-650600 Enhancers Skeletal Muscle Male skeletal muscle
19 chr9:648800-650800 Enhancers Rectal Smooth Muscle rectum
20 chr9:648800-650800 Enhancers HMEC breast
21 chr9:648800-651200 Enhancers Primary B cells from peripheral blood blood
22 chr9:648800-651800 Enhancers Brain Anterior Caudate brain
23 chr9:649000-649800 Enhancers Primary T killer memory cells from peripheral blood blood
24 chr9:649000-649800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
25 chr9:649000-650000 Enhancers HUES48 Cell Line embryonic stem cell
26 chr9:649000-650200 Enhancers Primary T helper cells fromperipheralblood blood
27 chr9:649000-650400 Enhancers Fetal Kidney kidney
28 chr9:649000-650600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr9:649000-651800 Enhancers Brain Cingulate Gyrus brain
30 chr9:649000-651800 Enhancers Brain Substantia Nigra brain
31 chr9:649200-649800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
32 chr9:649200-650000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr9:649200-650200 Enhancers Primary B cells from cord blood blood
34 chr9:649200-650400 Enhancers Primary T helper naive cells fromperipheralblood blood
35 chr9:649200-650400 Flanking Active TSS Colon Smooth Muscle Colon
36 chr9:649200-650800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr9:649200-650800 Enhancers Fetal Muscle Leg muscle
38 chr9:649200-651000 Enhancers Primary hematopoietic stem cells blood
39 chr9:649200-651600 Enhancers Primary hematopoietic stem cells short term culture blood
40 chr9:649200-651600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr9:649400-650000 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr9:649400-650000 Enhancers Spleen Spleen
43 chr9:649400-650400 Flanking Active TSS Fetal Heart heart
44 chr9:649400-650400 Enhancers Dnd41 blood
45 chr9:649400-650400 Enhancers NHLF lung
46 chr9:649400-650600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr9:649400-650600 Flanking Active TSS NHEK skin
48 chr9:649400-650800 Enhancers H9 Cell Line embryonic stem cell
49 chr9:649400-650800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr9:649400-650800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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