Variant report

Variant rs16976817
Chromosome Location chr19:44341340-44341341
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44332000-44344400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:44332400-44343400 Weak transcription Stomach Mucosa stomach
3 chr19:44332600-44342400 Strong transcription Placenta Placenta
4 chr19:44332800-44343000 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr19:44332800-44343000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr19:44332800-44343400 Strong transcription Fetal Muscle Trunk muscle
7 chr19:44332800-44348200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr19:44332800-44357200 ZNF genes & repeats Liver Liver
9 chr19:44333000-44342200 Strong transcription Skeletal Muscle Male skeletal muscle
10 chr19:44333200-44342200 Strong transcription Muscle Satellite Cultured Cells --
11 chr19:44333600-44357400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr19:44333800-44343800 Strong transcription Placenta Amnion Placenta Amnion
13 chr19:44334000-44347400 ZNF genes & repeats Primary hematopoietic stem cells blood
14 chr19:44334000-44353200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr19:44335200-44346200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr19:44335200-44357200 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr19:44335200-44368200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr19:44335400-44346000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr19:44335400-44357200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
20 chr19:44335400-44366600 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
21 chr19:44336400-44342600 Strong transcription Primary T killer memory cells from peripheral blood blood
22 chr19:44336400-44342600 Strong transcription Right Ventricle heart
23 chr19:44336600-44342000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr19:44336600-44342600 ZNF genes & repeats Fetal Kidney kidney
25 chr19:44336600-44357600 ZNF genes & repeats Adipose Nuclei Adipose
26 chr19:44336800-44342800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
27 chr19:44336800-44353000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
28 chr19:44336800-44356800 ZNF genes & repeats Duodenum Mucosa Duodenum
29 chr19:44336800-44357200 ZNF genes & repeats Fetal Lung lung
30 chr19:44337200-44347800 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
31 chr19:44337800-44342400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr19:44337800-44342600 Strong transcription HSMMtube muscle
33 chr19:44337800-44347600 ZNF genes & repeats Fetal Muscle Leg muscle
34 chr19:44338000-44349600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
35 chr19:44338000-44352800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
36 chr19:44338600-44342800 ZNF genes & repeats Lung lung
37 chr19:44338800-44342400 Strong transcription Thymus Thymus
38 chr19:44339000-44341400 Strong transcription Primary T helper naive cells from peripheral blood blood
39 chr19:44339000-44343000 ZNF genes & repeats Fetal Intestine Small intestine
40 chr19:44339000-44349600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
41 chr19:44339000-44352800 ZNF genes & repeats Rectal Smooth Muscle rectum
42 chr19:44339000-44355400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
43 chr19:44339200-44341400 ZNF genes & repeats HSMM muscle
44 chr19:44339200-44341600 ZNF genes & repeats Fetal Stomach stomach
45 chr19:44339200-44341800 ZNF genes & repeats Pancreas Pancrea
46 chr19:44339200-44342800 ZNF genes & repeats Aorta Aorta
47 chr19:44339200-44342800 ZNF genes & repeats Ovary ovary
48 chr19:44339200-44342800 ZNF genes & repeats Small Intestine intestine
49 chr19:44339200-44342800 ZNF genes & repeats Spleen Spleen
50 chr19:44339200-44344200 ZNF genes & repeats Stomach Smooth Muscle stomach

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