Variant report

Variant rs16987289
Chromosome Location chr19:57002362-57002363
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56990800-57010000 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr19:56991000-57005400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr19:56991200-57006800 Weak transcription Muscle Satellite Cultured Cells --
4 chr19:56991200-57006800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr19:56992000-57009400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
6 chr19:56992000-57009800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
7 chr19:56992400-57004800 Weak transcription Right Ventricle heart
8 chr19:56996400-57005200 Weak transcription Fetal Stomach stomach
9 chr19:56998600-57003600 ZNF genes & repeats Ovary ovary
10 chr19:56998600-57008800 ZNF genes & repeats Primary hematopoietic stem cells blood
11 chr19:56999600-57005400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr19:56999800-57006000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr19:57001000-57005600 Weak transcription HSMM muscle
14 chr19:57001200-57003200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr19:57001400-57003600 Enhancers ES-I3 Cell Line embryonic stem cell
16 chr19:57001400-57003800 Enhancers Fetal Heart heart
17 chr19:57001800-57003000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
18 chr19:57001800-57003200 ZNF genes & repeats Brain Hippocampus Middle brain
19 chr19:57001800-57005800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
20 chr19:57002000-57002600 Enhancers HUES64 Cell Line embryonic stem cell
21 chr19:57002000-57002600 Enhancers HSMMtube muscle
22 chr19:57002000-57003000 Enhancers H1 Cell Line embryonic stem cell
23 chr19:57002200-57003000 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr19:57002200-57005400 Weak transcription Left Ventricle heart
25 chr19:57002200-57005400 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr19:57002200-57005600 Weak transcription Stomach Smooth Muscle stomach

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