The 2.0 version of rSNPBase

Variant report

Variant rs17007927
Chromosome Location chr2:72413594-72413595
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:72393600-72414800 Weak transcription NHEK skin
2 chr2:72400800-72414000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr2:72401600-72414000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr2:72401600-72415200 Weak transcription H9 Cell Line embryonic stem cell
5 chr2:72403400-72414200 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr2:72405400-72414000 Weak transcription Fetal Intestine Small intestine
7 chr2:72405600-72414000 Weak transcription Lung lung
8 chr2:72405800-72418600 Weak transcription Brain Angular Gyrus brain
9 chr2:72406400-72425800 Weak transcription Brain Anterior Caudate brain
10 chr2:72406600-72414000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr2:72406600-72414000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr2:72406600-72414000 Weak transcription Placenta Placenta
13 chr2:72406600-72414200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr2:72406600-72414600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:72406600-72415800 Weak transcription Placenta Amnion Placenta Amnion
16 chr2:72406800-72414000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr2:72406800-72414400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr2:72406800-72418600 Weak transcription Brain Cingulate Gyrus brain
19 chr2:72406800-72419800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr2:72407000-72414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr2:72407000-72414600 Weak transcription Brain Germinal Matrix brain
22 chr2:72407000-72415000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr2:72407200-72415800 Weak transcription Stomach Smooth Muscle stomach
24 chr2:72407200-72425200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr2:72407600-72414000 Weak transcription Fetal Brain Female brain
26 chr2:72407600-72418400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr2:72407800-72414600 Weak transcription Fetal Stomach stomach
28 chr2:72407800-72424600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr2:72408800-72414200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr2:72409200-72414800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr2:72409600-72426000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr2:72409800-72414200 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr2:72410400-72414000 Weak transcription Spleen Spleen
34 chr2:72410600-72420000 Weak transcription A549 lung
35 chr2:72410800-72414600 Weak transcription Adipose Nuclei Adipose
36 chr2:72410800-72418000 Weak transcription Duodenum Mucosa Duodenum
37 chr2:72411000-72415200 Weak transcription Right Atrium heart
38 chr2:72411200-72414000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr2:72412400-72414200 Weak transcription Small Intestine intestine
40 chr2:72412800-72414000 Weak transcription Esophagus oesophagus
41 chr2:72412800-72414800 Weak transcription Aorta Aorta
42 chr2:72412800-72421600 Weak transcription Gastric stomach
43 chr2:72412800-72425400 Weak transcription Stomach Mucosa stomach
44 chr2:72412800-72429800 Weak transcription Right Ventricle heart
45 chr2:72412800-72431000 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015