The 2.0 version of rSNPBase

Variant report

Variant rs17013948
Chromosome Location chr4:129854831-129854832
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:129793800-129907200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr4:129794400-129860200 Weak transcription Thymus Thymus
3 chr4:129821400-129867800 Weak transcription Fetal Intestine Small intestine
4 chr4:129829800-129873000 Weak transcription Brain Substantia Nigra brain
5 chr4:129834400-129862800 Weak transcription Muscle Satellite Cultured Cells --
6 chr4:129834800-129907400 Weak transcription Aorta Aorta
7 chr4:129837200-129859600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr4:129837600-129888200 Weak transcription Duodenum Mucosa Duodenum
9 chr4:129839400-129860200 Weak transcription Primary T cells fromperipheralblood blood
10 chr4:129839400-129862800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr4:129839600-129856400 Weak transcription Primary B cells from cord blood blood
12 chr4:129839600-129882800 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr4:129839800-129862200 Weak transcription Primary hematopoietic stem cells blood
14 chr4:129839800-129882800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr4:129839800-129907800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
16 chr4:129840600-129863400 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr4:129841000-129907400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr4:129842200-129863400 Weak transcription Fetal Lung lung
19 chr4:129843600-129888000 Weak transcription Fetal Muscle Leg muscle
20 chr4:129844000-129856400 Weak transcription HSMM muscle
21 chr4:129844800-129867200 Weak transcription Left Ventricle heart
22 chr4:129845000-129882800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr4:129845400-129907400 Weak transcription Brain Hippocampus Middle brain
24 chr4:129845800-129907200 Weak transcription Ovary ovary
25 chr4:129846200-129863000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr4:129846200-129863400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr4:129846400-129859600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr4:129846400-129860200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr4:129847200-129862600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr4:129847600-129857000 Weak transcription Primary B cells from peripheral blood blood
31 chr4:129847600-129859400 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr4:129847600-129863200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:129847800-129855400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr4:129847800-129855400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr4:129847800-129857000 Weak transcription Fetal Thymus thymus
36 chr4:129847800-129862800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr4:129847800-129863000 Weak transcription Fetal Intestine Large intestine
38 chr4:129847800-129863000 Weak transcription NH-A brain
39 chr4:129847800-129863600 Weak transcription Primary T cells from cord blood blood
40 chr4:129847800-129895400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr4:129848200-129860600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr4:129848800-129855800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr4:129848800-129856400 Weak transcription Dnd41 blood
44 chr4:129848800-129867600 Weak transcription Fetal Stomach stomach
45 chr4:129849000-129863400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr4:129849600-129863400 Weak transcription Adipose Nuclei Adipose
47 chr4:129850200-129860600 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr4:129850600-129869600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr4:129851000-129863000 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr4:129851000-129879000 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015