Variant report
| Variant | rs61177405 |
|---|---|
| Chromosome Location | chr4:130002026-130002027 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:129985200-130002200 | Weak transcription | Pancreas | Pancrea |
| 2 | chr4:129985200-130012200 | Weak transcription | HSMM | muscle |
| 3 | chr4:129985200-130013000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 4 | chr4:129985200-130013200 | Weak transcription | Colon Smooth Muscle | Colon |
| 5 | chr4:129987000-130011600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 6 | chr4:129990400-130004000 | Weak transcription | Right Ventricle | heart |
| 7 | chr4:129991600-130011800 | Weak transcription | Hela-S3 | cervix |
| 8 | chr4:129991800-130012000 | Weak transcription | HUVEC | blood vessel |
| 9 | chr4:129992200-130003600 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 10 | chr4:129992200-130005400 | Weak transcription | Psoas Muscle | Psoas |
| 11 | chr4:129992600-130005800 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 12 | chr4:129992600-130012000 | Weak transcription | HepG2 | liver |
| 13 | chr4:129993000-130007600 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 14 | chr4:129993000-130012000 | Weak transcription | Stomach Mucosa | stomach |
| 15 | chr4:129995600-130002800 | Weak transcription | NHDF-Ad | bronchial |
| 16 | chr4:129995600-130011400 | Weak transcription | A549 | lung |
| 17 | chr4:129997200-130012000 | Weak transcription | NHEK | skin |
| 18 | chr4:129997600-130002400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 19 | chr4:129997600-130010000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 20 | chr4:129998800-130003000 | ZNF genes & repeats | Primary hematopoietic stem cells | blood |
| 21 | chr4:129998800-130003000 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 22 | chr4:129998800-130003000 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 23 | chr4:129999000-130002800 | ZNF genes & repeats | Brain Germinal Matrix | brain |
| 24 | chr4:129999000-130002800 | ZNF genes & repeats | Fetal Brain Female | brain |
| 25 | chr4:129999000-130003000 | ZNF genes & repeats | H9 Derived Neuron Cultured Cells | ES cell derived |
| 26 | chr4:129999000-130003000 | Strong transcription | Primary T cells from cord blood | blood |
| 27 | chr4:129999000-130003000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 28 | chr4:129999000-130003400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 29 | chr4:129999000-130008200 | ZNF genes & repeats | GM12878-XiMat | blood |
| 30 | chr4:129999200-130006400 | Weak transcription | Fetal Kidney | kidney |
| 31 | chr4:129999200-130012600 | Weak transcription | NH-A | brain |
| 32 | chr4:129999400-130005400 | Weak transcription | Brain Substantia Nigra | brain |
| 33 | chr4:129999400-130011400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 34 | chr4:129999800-130003400 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 35 | chr4:130000000-130002400 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 36 | chr4:130000000-130002600 | Strong transcription | Primary T killer memory cells from peripheral blood | blood |
| 37 | chr4:130000000-130002600 | Strong transcription | Rectal Mucosa Donor 29 | rectum |
| 38 | chr4:130000000-130002800 | Strong transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 39 | chr4:130000000-130002800 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 40 | chr4:130000000-130002800 | ZNF genes & repeats | Fetal Muscle Leg | muscle |
| 41 | chr4:130000000-130002800 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 42 | chr4:130000000-130003000 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 43 | chr4:130000000-130003000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 44 | chr4:130000000-130003200 | ZNF genes & repeats | Primary monocytes fromperipheralblood | blood |
| 45 | chr4:130000000-130003600 | ZNF genes & repeats | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 46 | chr4:130000200-130002200 | ZNF genes & repeats | Primary Natural Killer cells fromperipheralblood | blood |
| 47 | chr4:130000200-130002600 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 48 | chr4:130000200-130002600 | Strong transcription | Brain Hippocampus Middle | brain |
| 49 | chr4:130000200-130002800 | Strong transcription | Brain Cingulate Gyrus | brain |
| 50 | chr4:130000200-130002800 | Strong transcription | Fetal Intestine Large | intestine |
