Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs17023659	0.87[ASN][1000 genomes]
rs17023710	0.87[ASN][1000 genomes]
rs17023801	0.87[ASN][1000 genomes]
rs17023820	1.00[CEU][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62148077	0.87[ASN][1000 genomes]
rs62148078	0.87[ASN][1000 genomes]
rs62148079	0.87[ASN][1000 genomes]
rs62148080	0.87[ASN][1000 genomes]
rs62148082	0.87[ASN][1000 genomes]
rs62148083	0.87[ASN][1000 genomes]
rs62148084	0.87[ASN][1000 genomes]
rs62148085	0.87[ASN][1000 genomes]
rs62148086	0.87[ASN][1000 genomes]
rs62148087	0.87[ASN][1000 genomes]
rs62148088	0.87[ASN][1000 genomes]
rs62148089	0.87[ASN][1000 genomes]
rs62148090	0.87[ASN][1000 genomes]
rs62148092	0.87[ASN][1000 genomes]
rs62148093	0.87[ASN][1000 genomes]
rs62148094	0.87[ASN][1000 genomes]
rs62148095	0.87[ASN][1000 genomes]
rs62150291	0.87[ASN][1000 genomes]
rs6735369	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007777	chr2:100816913-101308914	Active TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
2	nsv535844	chr2:100816913-101308914	Flanking Bivalent TSS/Enh Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
3	nsv834311	chr2:100816917-100990036	Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:100844200-100851400	Weak transcription	Primary hematopoietic stem cells	blood
2	chr2:100847400-100851600	Weak transcription	Lung	lung
3	chr2:100847600-100850600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr2:100848400-100850600	Weak transcription	Fetal Lung	lung
5	chr2:100849200-100850000	Enhancers	Fetal Heart	heart
6	chr2:100849400-100856000	Enhancers	Primary B cells from peripheral blood	blood
7	chr2:100849600-100850000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr2:100849600-100850800	Weak transcription	Primary B cells from cord blood	blood

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