Variant report

Variant	rs17034036
Chromosome Location	chr2:67864989-67864990
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10184721	0.86[ASN][1000 genomes]
rs11900117	0.86[ASN][1000 genomes]
rs11904407	1.00[ASN][1000 genomes]
rs13398896	0.86[ASN][1000 genomes]
rs1367476	1.00[EUR][1000 genomes]
rs2861704	1.00[EUR][1000 genomes]
rs2902024	0.86[ASN][1000 genomes]
rs6546321	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6708296	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6726761	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6757264	0.86[ASN][1000 genomes]
rs6760771	0.86[ASN][1000 genomes]
rs72899995	0.86[ASN][1000 genomes]
rs7568300	1.00[ASN][1000 genomes]
rs7570412	1.00[ASN][1000 genomes]
rs7573396	0.86[ASN][1000 genomes]
rs7579880	1.00[ASN][1000 genomes]
rs7582772	0.86[ASN][1000 genomes]
rs7589963	0.86[ASN][1000 genomes]
rs7604451	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67864200-67865400	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr2:67864200-67867200	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr2:67864600-67866400	Enhancers	Fetal Heart	heart
4	chr2:67864800-67867000	Weak transcription	Psoas Muscle	Psoas

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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