Variant report

Variant	rs17044180
Chromosome Location	chr3:79261640-79261641
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10511123	1.00[CEU][hapmap]
rs11920038	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap]
rs11920171	1.00[GIH][hapmap];0.93[EUR][1000 genomes]
rs11923133	0.93[EUR][1000 genomes]
rs11924816	1.00[GIH][hapmap];0.83[TSI][hapmap];0.93[EUR][1000 genomes]
rs11925923	0.87[TSI][hapmap]
rs12629799	0.94[ASW][hapmap];0.85[YRI][hapmap]
rs1565345	0.86[YRI][hapmap]
rs17016763	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs4334606	0.87[TSI][hapmap]
rs4405871	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs4532095	0.87[TSI][hapmap]
rs59193819	0.93[EUR][1000 genomes]
rs6768393	0.90[EUR][1000 genomes]
rs6782878	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap]
rs6801676	0.87[AFR][1000 genomes]
rs716681	1.00[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7639472	1.00[CEU][hapmap];1.00[EUR][1000 genomes]
rs964137	0.86[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763281	chr3:79246361-79489765	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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