Variant report

Variant rs17080456
Chromosome Location chr6:118985938-118985939
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118973400-118988800 Weak transcription NH-A brain
2 chr6:118973600-118989000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr6:118978200-118989800 Weak transcription Primary hematopoietic stem cells blood
4 chr6:118981600-118986200 Weak transcription Pancreas Pancrea
5 chr6:118981600-118988800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr6:118981600-118989600 Weak transcription Left Ventricle heart
7 chr6:118981800-118988000 Weak transcription Fetal Lung lung
8 chr6:118982000-118989000 Weak transcription K562 blood
9 chr6:118983600-118990200 Weak transcription Primary hematopoietic stem cells short term culture blood
10 chr6:118985000-118986400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
11 chr6:118985200-118986400 Genic enhancers Fetal Thymus thymus
12 chr6:118985200-118986400 Enhancers Spleen Spleen
13 chr6:118985200-118987000 Enhancers Primary B cells from peripheral blood blood
14 chr6:118985200-118987200 Enhancers Stomach Mucosa stomach
15 chr6:118985400-118986000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr6:118985400-118986000 Active TSS Skeletal Muscle Female skeletal muscle
17 chr6:118985400-118986000 Active TSS HSMM muscle
18 chr6:118985400-118986200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr6:118985400-118986200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr6:118985400-118986200 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
21 chr6:118985400-118986200 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
22 chr6:118985400-118986200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
23 chr6:118985400-118986200 Active TSS Ovary ovary
24 chr6:118985400-118986400 Enhancers Primary B cells from cord blood blood
25 chr6:118985400-118986400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
26 chr6:118985400-118986400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
27 chr6:118985400-118986400 Active TSS Pancreatic Islets Pancreatic Islet
28 chr6:118985400-118986400 Active TSS NHDF-Ad bronchial
29 chr6:118985400-118986400 Active TSS NHLF lung
30 chr6:118985400-118986400 Flanking Active TSS Osteobl bone
31 chr6:118985600-118986000 Flanking Active TSS Primary T cells from cord blood blood
32 chr6:118985600-118986000 Active TSS Primary T helper memory cells from peripheral blood 1 blood
33 chr6:118985600-118986000 Active TSS Primary T helper 17 cells PMA-I stimulated --
34 chr6:118985600-118986000 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
35 chr6:118985600-118986000 Active TSS Adipose Nuclei Adipose
36 chr6:118985600-118986000 Active TSS Brain Angular Gyrus brain
37 chr6:118985600-118986000 Active TSS Rectal Mucosa Donor 29 rectum
38 chr6:118985600-118986000 Active TSS Rectal Mucosa Donor 31 rectum
39 chr6:118985600-118986000 Flanking Active TSS Thymus Thymus
40 chr6:118985600-118986200 Active TSS Primary T killer memory cells from peripheral blood blood
41 chr6:118985600-118986200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
42 chr6:118985600-118986200 Active TSS Brain Inferior Temporal Lobe brain
43 chr6:118985600-118986200 Active TSS Colonic Mucosa Colon
44 chr6:118985600-118986200 Active TSS Stomach Smooth Muscle stomach
45 chr6:118985600-118986400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr6:118985600-118986400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr6:118985600-118986400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
48 chr6:118985600-118986400 Enhancers Fetal Muscle Leg muscle
49 chr6:118985600-118986400 Enhancers Dnd41 blood
50 chr6:118985800-118986000 Active TSS Muscle Satellite Cultured Cells --

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