The 2.0 version of rSNPBase

Variant report

Variant rs62424200
Chromosome Location chr6:118838782-118838783
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118791000-118846000 Weak transcription Gastric stomach
2 chr6:118807400-118842600 Weak transcription NHLF lung
3 chr6:118810000-118845800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr6:118812400-118845800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr6:118813200-118842800 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr6:118814600-118844400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr6:118814600-118846200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:118816000-118843400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr6:118817200-118842400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:118817400-118845800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr6:118817400-118845800 Weak transcription Pancreas Pancrea
12 chr6:118817400-118845800 Weak transcription HMEC breast
13 chr6:118817400-118847200 Weak transcription Brain Inferior Temporal Lobe brain
14 chr6:118817600-118846600 Weak transcription HUVEC blood vessel
15 chr6:118822200-118846600 Weak transcription Brain Hippocampus Middle brain
16 chr6:118822600-118846600 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr6:118822800-118846600 Weak transcription Stomach Smooth Muscle stomach
18 chr6:118824000-118843600 Weak transcription Osteobl bone
19 chr6:118824200-118841200 Weak transcription Primary hematopoietic stem cells blood
20 chr6:118824200-118858800 Weak transcription NH-A brain
21 chr6:118824200-118869800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr6:118824600-118842800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:118825800-118846200 Weak transcription HSMMtube muscle
24 chr6:118826000-118846000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr6:118826200-118840000 Weak transcription Primary B cells from peripheral blood blood
26 chr6:118826200-118840200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr6:118826200-118842000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr6:118826200-118842800 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr6:118826200-118843400 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr6:118826200-118843800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr6:118826200-118843800 Weak transcription Fetal Lung lung
32 chr6:118826200-118844400 Weak transcription Liver Liver
33 chr6:118826200-118846600 Weak transcription Ovary ovary
34 chr6:118826400-118839800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:118826400-118842600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr6:118826400-118842800 Weak transcription Fetal Muscle Leg muscle
37 chr6:118826400-118842800 Weak transcription Fetal Stomach stomach
38 chr6:118826400-118846400 Weak transcription Fetal Muscle Trunk muscle
39 chr6:118826400-118847600 Weak transcription Thymus Thymus
40 chr6:118826800-118843400 Weak transcription Primary T cells from cord blood blood
41 chr6:118827000-118839000 Weak transcription Fetal Thymus thymus
42 chr6:118827600-118846000 Weak transcription Primary B cells from cord blood blood
43 chr6:118830800-118843400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr6:118832400-118841800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr6:118832600-118840200 Weak transcription Dnd41 blood
46 chr6:118832600-118842000 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr6:118832600-118844600 Weak transcription HSMM muscle
48 chr6:118832600-118852800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr6:118832800-118840800 Weak transcription Primary monocytes fromperipheralblood blood
50 chr6:118833000-118841800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015