Variant report

Variant rs9489436
Chromosome Location chr6:118873817-118873818
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118844800-118875800 Weak transcription Primary T cells fromperipheralblood blood
2 chr6:118845200-118880000 Weak transcription Primary monocytes fromperipheralblood blood
3 chr6:118846000-118875600 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr6:118846200-118878600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr6:118847800-118895400 Weak transcription Pancreas Pancrea
6 chr6:118852600-118895200 Weak transcription Primary B cells from cord blood blood
7 chr6:118859400-118880200 Weak transcription Brain Hippocampus Middle brain
8 chr6:118864400-118895200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr6:118867000-118878800 Active TSS Right Atrium heart
10 chr6:118867800-118875200 Active TSS Aorta Aorta
11 chr6:118867800-118877200 Active TSS Stomach Smooth Muscle stomach
12 chr6:118868600-118874400 Active TSS Colon Smooth Muscle Colon
13 chr6:118868600-118875200 Active TSS Skeletal Muscle Male skeletal muscle
14 chr6:118868600-118894000 Weak transcription Fetal Stomach stomach
15 chr6:118869200-118874200 Active TSS Psoas Muscle Psoas
16 chr6:118869400-118880400 Active TSS Right Ventricle heart
17 chr6:118870000-118874000 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr6:118870600-118875400 Enhancers Primary T helper cells PMA-I stimulated --
19 chr6:118871000-118874600 Enhancers Primary T cells from cord blood blood
20 chr6:118871600-118874200 Active TSS Left Ventricle heart
21 chr6:118871600-118874600 Enhancers NHLF lung
22 chr6:118871600-118875600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr6:118871800-118874000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr6:118872200-118874000 Enhancers NHDF-Ad bronchial
25 chr6:118872200-118886600 Weak transcription Fetal Kidney kidney
26 chr6:118872200-118895200 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr6:118872400-118874000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr6:118872400-118874400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr6:118872400-118874400 Weak transcription Primary T killer naive cells fromperipheralblood blood
30 chr6:118872400-118874600 Enhancers Fetal Adrenal Gland Adrenal Gland
31 chr6:118872400-118878600 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr6:118872400-118884000 Weak transcription Brain Angular Gyrus brain
33 chr6:118872400-118886200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:118872400-118886600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr6:118872600-118877400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr6:118872800-118874600 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr6:118872800-118874600 Enhancers HSMMtube muscle
38 chr6:118872800-118878600 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr6:118872800-118879000 ZNF genes & repeats Fetal Heart heart
40 chr6:118872800-118895200 Weak transcription HMEC breast
41 chr6:118873000-118875000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr6:118873000-118886400 Weak transcription Adipose Nuclei Adipose
43 chr6:118873200-118874400 Enhancers Rectal Smooth Muscle rectum
44 chr6:118873200-118874800 Enhancers Osteobl bone
45 chr6:118873200-118875000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr6:118873200-118875000 Active TSS Skeletal Muscle Female skeletal muscle
47 chr6:118873200-118876600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr6:118873200-118886400 Weak transcription Fetal Lung lung
49 chr6:118873400-118874200 Flanking Active TSS Duodenum Smooth Muscle Duodenum
50 chr6:118873600-118874200 Enhancers Primary mononuclear cells fromperipheralblood Blood

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