Variant report

Variant rs9489450
Chromosome Location chr6:118904385-118904386
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118895800-118911400 Weak transcription Right Ventricle heart
2 chr6:118896000-118909400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr6:118896200-118910000 Weak transcription Brain Inferior Temporal Lobe brain
4 chr6:118900400-118910200 Weak transcription Fetal Lung lung
5 chr6:118900400-118911200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr6:118901000-118926200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:118901400-118908000 Enhancers Psoas Muscle Psoas
8 chr6:118901400-118913000 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr6:118901600-118904400 Enhancers Primary monocytes fromperipheralblood blood
10 chr6:118901600-118904400 Enhancers Monocytes-CD14+_RO01746 blood
11 chr6:118901600-118906400 Enhancers Fetal Adrenal Gland Adrenal Gland
12 chr6:118901600-118912000 Strong transcription Primary T cells from cord blood blood
13 chr6:118901800-118905000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
14 chr6:118902000-118927400 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr6:118902200-118904600 Enhancers Skeletal Muscle Female skeletal muscle
16 chr6:118902200-118905800 Weak transcription Fetal Stomach stomach
17 chr6:118902200-118910400 Weak transcription Ovary ovary
18 chr6:118902200-118911400 Weak transcription Stomach Smooth Muscle stomach
19 chr6:118902200-118911600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr6:118902200-118939800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr6:118902400-118904400 Enhancers Stomach Mucosa stomach
22 chr6:118902400-118908200 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr6:118902400-118917400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr6:118902400-118918000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr6:118902400-118924800 Weak transcription Primary B cells from peripheral blood blood
26 chr6:118902400-118927400 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr6:118902600-118904600 Enhancers Gastric stomach
28 chr6:118902600-118909800 Weak transcription Brain Hippocampus Middle brain
29 chr6:118902800-118904400 Strong transcription Thymus Thymus
30 chr6:118902800-118911200 Weak transcription Primary hematopoietic stem cells blood
31 chr6:118902800-118911200 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr6:118903000-118906600 Strong transcription Fetal Thymus thymus
33 chr6:118903000-118910000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr6:118903200-118907000 Strong transcription Primary T cells fromperipheralblood blood
35 chr6:118903200-118910800 Weak transcription NHLF lung
36 chr6:118903400-118907000 Weak transcription Muscle Satellite Cultured Cells --
37 chr6:118903600-118904400 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
38 chr6:118903600-118907600 Weak transcription Duodenum Mucosa Duodenum
39 chr6:118903600-118924200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr6:118903800-118905000 Weak transcription Brain Substantia Nigra brain
41 chr6:118903800-118905400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr6:118903800-118906000 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr6:118903800-118907600 Weak transcription Pancreas Pancrea
44 chr6:118903800-118910600 Weak transcription Osteobl bone
45 chr6:118903800-118911400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr6:118904000-118904800 Strong transcription Fetal Muscle Leg muscle
47 chr6:118904000-118905800 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr6:118904000-118924200 Weak transcription Primary B cells from cord blood blood
49 chr6:118904200-118904400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr6:118904200-118904400 Enhancers Placenta Amnion Placenta Amnion

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