Variant report

Variant rs9489407
Chromosome Location chr6:118792337-118792338
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118774400-118808600 Weak transcription Placenta Amnion Placenta Amnion
2 chr6:118776000-118792400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr6:118776800-118808800 Weak transcription Fetal Stomach stomach
4 chr6:118779600-118799600 Weak transcription NHDF-Ad bronchial
5 chr6:118779800-118797600 Weak transcription Brain Cingulate Gyrus brain
6 chr6:118781200-118797200 Weak transcription Brain Substantia Nigra brain
7 chr6:118783400-118792800 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr6:118783800-118808600 Weak transcription Fetal Kidney kidney
9 chr6:118784400-118794800 Weak transcription Aorta Aorta
10 chr6:118784600-118792600 Strong transcription Primary T cells fromperipheralblood blood
11 chr6:118784600-118808400 Weak transcription Small Intestine intestine
12 chr6:118784600-118827600 Weak transcription Esophagus oesophagus
13 chr6:118784800-118792800 Strong transcription Primary T helper cells PMA-I stimulated --
14 chr6:118784800-118807000 Weak transcription Right Ventricle heart
15 chr6:118785000-118793800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr6:118785000-118795800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:118785000-118800000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr6:118785000-118810000 Weak transcription Spleen Spleen
19 chr6:118785000-118813400 Weak transcription ES-WA7 Cell Line embryonic stem cell
20 chr6:118785000-118816600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:118785200-118797600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr6:118785800-118808000 Weak transcription Brain Germinal Matrix brain
23 chr6:118786000-118792400 Weak transcription Stomach Smooth Muscle stomach
24 chr6:118786000-118792600 Strong transcription HSMM muscle
25 chr6:118786800-118795400 Weak transcription Fetal Brain Male brain
26 chr6:118786800-118797200 Weak transcription Brain Angular Gyrus brain
27 chr6:118786800-118800000 Weak transcription NH-A brain
28 chr6:118786800-118807400 Weak transcription K562 blood
29 chr6:118786800-118808800 Weak transcription Lung lung
30 chr6:118787600-118798000 Weak transcription Colon Smooth Muscle Colon
31 chr6:118788400-118808600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr6:118788400-118809800 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr6:118789000-118808400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr6:118789000-118809400 Weak transcription Fetal Intestine Large intestine
35 chr6:118789400-118807000 Weak transcription Psoas Muscle Psoas
36 chr6:118789600-118808000 Weak transcription Rectal Smooth Muscle rectum
37 chr6:118789800-118793000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr6:118790000-118797800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr6:118790200-118797200 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr6:118790200-118810600 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr6:118790400-118795600 Weak transcription Left Ventricle heart
42 chr6:118790400-118797800 Weak transcription Brain Anterior Caudate brain
43 chr6:118790400-118799200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr6:118790400-118808400 Weak transcription Fetal Brain Female brain
45 chr6:118790400-118816800 Weak transcription Muscle Satellite Cultured Cells --
46 chr6:118790600-118797400 Weak transcription Brain Hippocampus Middle brain
47 chr6:118790600-118800000 Weak transcription HMEC breast
48 chr6:118790600-118800200 Weak transcription NHLF lung
49 chr6:118790600-118806600 Weak transcription GM12878-XiMat blood
50 chr6:118790800-118792400 Weak transcription Stomach Mucosa stomach

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