Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10483662	1.00[EUR][1000 genomes]
rs10498480	1.00[EUR][1000 genomes]
rs10498482	1.00[EUR][1000 genomes]
rs17090767	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17090791	1.00[EUR][1000 genomes]
rs17090840	1.00[EUR][1000 genomes]
rs17090844	1.00[EUR][1000 genomes]
rs17090848	1.00[EUR][1000 genomes]
rs17090859	1.00[EUR][1000 genomes]
rs2046095	1.00[EUR][1000 genomes]
rs58798057	1.00[EUR][1000 genomes]
rs73287424	1.00[EUR][1000 genomes]
rs74051596	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74051597	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74051598	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74051599	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74051600	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs74051601	1.00[EUR][1000 genomes]
rs74051602	1.00[EUR][1000 genomes]
rs74054303	1.00[EUR][1000 genomes]
rs74054305	1.00[EUR][1000 genomes]
rs8017790	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901966	chr14:56160904-56436203	Weak transcription Bivalent Enhancer Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv901977	chr14:56213392-56492996	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv34106	chr14:56346245-56550642	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv1042669	chr14:56407744-56435077	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv1036163	chr14:56413023-56435077	Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56425000-56435600	Weak transcription	Fetal Muscle Leg	muscle
2	chr14:56425200-56430200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:56425200-56430800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr14:56425400-56431800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr14:56425600-56431000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr14:56426600-56430400	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr14:56428600-56429000	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr14:56428600-56429000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr14:56428600-56429400	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr14:56428800-56429000	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr14:56428800-56429200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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