Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:56543596..56545113-chr5:172750348..172752553,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000113739	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10483662	1.00[EUR][1000 genomes]
rs10498480	1.00[EUR][1000 genomes]
rs10498482	1.00[EUR][1000 genomes]
rs17090767	1.00[EUR][1000 genomes]
rs17090780	1.00[EUR][1000 genomes]
rs17090791	1.00[EUR][1000 genomes]
rs17090840	1.00[EUR][1000 genomes]
rs17090844	1.00[EUR][1000 genomes]
rs17090848	1.00[EUR][1000 genomes]
rs17090859	1.00[EUR][1000 genomes]
rs2046095	0.81[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58798057	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73287424	1.00[EUR][1000 genomes]
rs73287467	0.83[AMR][1000 genomes]
rs74051596	1.00[EUR][1000 genomes]
rs74051597	1.00[EUR][1000 genomes]
rs74051598	1.00[EUR][1000 genomes]
rs74051599	1.00[EUR][1000 genomes]
rs74051600	1.00[EUR][1000 genomes]
rs74051601	1.00[EUR][1000 genomes]
rs74051602	1.00[EUR][1000 genomes]
rs74054303	1.00[EUR][1000 genomes]
rs74054305	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34106	chr14:56346245-56550642	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:56541000-56554200	Weak transcription	Gastric	stomach

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