The 2.0 version of rSNPBase

Variant report

Variant rs17090792
Chromosome Location chr1:71536296-71536297
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:71515800-71541000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr1:71520000-71536800 Weak transcription Aorta Aorta
3 chr1:71520600-71544600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:71521400-71544200 Strong transcription Adipose Nuclei Adipose
5 chr1:71521600-71536800 Weak transcription Stomach Mucosa stomach
6 chr1:71521800-71544600 Strong transcription HSMM muscle
7 chr1:71522000-71543800 Strong transcription Primary B cells from cord blood blood
8 chr1:71522000-71544200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr1:71522000-71544200 Strong transcription HUES64 Cell Line embryonic stem cell
10 chr1:71522000-71544200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:71522000-71544400 Strong transcription HMEC breast
12 chr1:71522200-71540800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr1:71522200-71544200 Strong transcription Muscle Satellite Cultured Cells --
14 chr1:71522200-71544600 Strong transcription Primary monocytes fromperipheralblood blood
15 chr1:71522400-71544200 Strong transcription Liver Liver
16 chr1:71522600-71544200 Strong transcription Rectal Mucosa Donor 29 rectum
17 chr1:71522600-71544200 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr1:71522600-71544400 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr1:71522600-71544400 Strong transcription NH-A brain
20 chr1:71522800-71540400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:71522800-71544400 Strong transcription Fetal Thymus thymus
22 chr1:71522800-71544600 Strong transcription HUES6 Cell Line embryonic stem cell
23 chr1:71522800-71544600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:71523000-71543800 Strong transcription Duodenum Mucosa Duodenum
25 chr1:71523000-71544400 Strong transcription Osteobl bone
26 chr1:71523000-71544600 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr1:71523000-71544600 Strong transcription Placenta Placenta
28 chr1:71523200-71540600 Strong transcription Dnd41 blood
29 chr1:71523200-71542800 Strong transcription K562 blood
30 chr1:71523200-71544200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:71523200-71544400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:71523400-71537200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:71523400-71544600 Strong transcription iPS-20b Cell Line embryonic stem cell
34 chr1:71523600-71544000 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr1:71523600-71544200 Strong transcription Primary B cells from peripheral blood blood
36 chr1:71523600-71544800 Strong transcription Primary T cells fromperipheralblood blood
37 chr1:71523600-71544800 Strong transcription Fetal Lung lung
38 chr1:71523800-71544000 Strong transcription Duodenum Smooth Muscle Duodenum
39 chr1:71523800-71544400 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr1:71524000-71542200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr1:71524400-71538600 Strong transcription Stomach Smooth Muscle stomach
42 chr1:71524400-71541000 Strong transcription Primary T helper cells PMA-I stimulated --
43 chr1:71524400-71541600 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr1:71524400-71542200 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr1:71524400-71544400 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr1:71524600-71539000 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:71524600-71544400 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr1:71525000-71540800 Strong transcription HUVEC blood vessel
49 chr1:71525000-71544600 Strong transcription H1 Cell Line embryonic stem cell
50 chr1:71525200-71543800 Strong transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015