Variant report

Variant	rs17107211
Chromosome Location	chr10:93690618-93690619
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:93687610..93690997-chr10:93694817..93697493,3	K562	blood:
2	chr10:93682327..93685380-chr10:93690100..93694062,4	K562	blood:
3	chr10:93591645..93593873-chr10:93689948..93691908,2	K562	blood:
4	chr10:93681915..93684932-chr10:93689132..93694686,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000095564	Chromatin interaction

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10430650	0.80[ASN][1000 genomes]
rs10509640	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11186744	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12251446	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12253972	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12254369	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12263532	0.80[ASN][1000 genomes]
rs12263639	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12266974	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12267763	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1581240	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2048901	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4288679	0.80[ASN][1000 genomes]
rs4509678	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7071659	0.88[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7077506	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7901434	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7904900	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7915659	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7924014	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93684200-93691200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr10:93684200-93691200	Weak transcription	Gastric	stomach
3	chr10:93684200-93691800	Weak transcription	Lung	lung
4	chr10:93684200-93692600	Weak transcription	Spleen	Spleen
5	chr10:93684200-93694000	Weak transcription	Esophagus	oesophagus
6	chr10:93684400-93691200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr10:93684400-93692600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr10:93684600-93719600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr10:93684800-93691200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
10	chr10:93685000-93691200	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr10:93685000-93691200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr10:93685000-93691200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr10:93685000-93691200	Weak transcription	Brain Anterior Caudate	brain
14	chr10:93685000-93691200	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr10:93685000-93691200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr10:93685000-93691200	Weak transcription	Fetal Muscle Trunk	muscle
17	chr10:93685000-93691200	Weak transcription	Fetal Muscle Leg	muscle
18	chr10:93685000-93691200	Weak transcription	Placenta	Placenta
19	chr10:93685000-93691400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr10:93685000-93691400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
21	chr10:93685000-93691400	Weak transcription	Primary hematopoietic stem cells	blood
22	chr10:93685000-93691400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr10:93685000-93691400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
24	chr10:93685000-93691400	Weak transcription	Fetal Intestine Small	intestine
25	chr10:93685000-93691400	Weak transcription	Stomach Smooth Muscle	stomach
26	chr10:93685000-93695600	Weak transcription	Primary neutrophils fromperipheralblood	blood
27	chr10:93685000-93695800	Weak transcription	Skeletal Muscle Male	skeletal muscle
28	chr10:93685000-93696000	Weak transcription	Aorta	Aorta
29	chr10:93685000-93696000	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr10:93685000-93696400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
31	chr10:93685000-93703600	Weak transcription	Colonic Mucosa	Colon
32	chr10:93685000-93706200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr10:93685000-93717800	Weak transcription	Small Intestine	intestine
34	chr10:93685200-93691200	Weak transcription	HUES6 Cell Line	embryonic stem cell
35	chr10:93685200-93691200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr10:93685200-93691200	Weak transcription	Adipose Nuclei	Adipose
37	chr10:93685200-93691200	Weak transcription	Rectal Mucosa Donor 29	rectum
38	chr10:93685200-93691400	Weak transcription	HSMMtube	muscle
39	chr10:93685200-93694400	Weak transcription	Fetal Kidney	kidney
40	chr10:93685200-93695400	Weak transcription	NH-A	brain
41	chr10:93685400-93691200	Weak transcription	Muscle Satellite Cultured Cells	--
42	chr10:93685400-93691200	Weak transcription	Right Ventricle	heart
43	chr10:93685600-93691200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr10:93685600-93691200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
45	chr10:93685800-93695400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr10:93685800-93735200	Weak transcription	Fetal Heart	heart
47	chr10:93686000-93691200	Weak transcription	Ovary	ovary
48	chr10:93686000-93691400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr10:93686000-93694200	Weak transcription	Cortex derived primary cultured neurospheres	brain
50	chr10:93686000-93695000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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