Variant report

Variant	rs17111076
Chromosome Location	chr10:90076402-90076403
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs12243208	1.00[EUR][1000 genomes]
rs17108692	1.00[EUR][1000 genomes]
rs17108887	1.00[EUR][1000 genomes]
rs17108894	1.00[EUR][1000 genomes]
rs17110722	1.00[EUR][1000 genomes]
rs17111193	0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs17388036	1.00[EUR][1000 genomes]
rs7070742	1.00[EUR][1000 genomes]
rs7084060	1.00[EUR][1000 genomes]
rs74146649	1.00[EUR][1000 genomes]
rs74146650	1.00[EUR][1000 genomes]
rs74146651	1.00[EUR][1000 genomes]
rs74146652	1.00[EUR][1000 genomes]
rs74146653	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895879	chr10:90015725-90219298	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv551838	chr10:90058637-90137045	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv482385	chr10:90066140-90259751	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:90075600-90076600	Enhancers	Fetal Thymus	thymus
2	chr10:90076200-90078200	Weak transcription	Thymus	Thymus
3	chr10:90076200-90078600	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr10:90076400-90078000	Weak transcription	Primary B cells from peripheral blood	blood
5	chr10:90076400-90078000	Weak transcription	Dnd41	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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