The 2.0 version of rSNPBase

Variant report

Variant rs17111192
Chromosome Location chr1:94638447-94638448
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94626800-94639200 Weak transcription NHLF lung
2 chr1:94626800-94639400 Weak transcription Psoas Muscle Psoas
3 chr1:94626800-94639400 Weak transcription NHEK skin
4 chr1:94626800-94643400 Weak transcription Fetal Heart heart
5 chr1:94627000-94639400 Weak transcription HSMMtube muscle
6 chr1:94629800-94639400 Weak transcription Spleen Spleen
7 chr1:94630800-94639400 Weak transcription Gastric stomach
8 chr1:94631400-94639400 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:94631800-94639800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:94631800-94646600 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr1:94632200-94639400 Weak transcription Pancreas Pancrea
12 chr1:94633200-94639400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:94633400-94639400 Weak transcription Left Ventricle heart
14 chr1:94634000-94639400 Weak transcription HUES64 Cell Line embryonic stem cell
15 chr1:94634200-94643000 Strong transcription HUVEC blood vessel
16 chr1:94634200-94656600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:94634200-94658400 Strong transcription HSMM muscle
18 chr1:94634200-94660800 Strong transcription NH-A brain
19 chr1:94634200-94661800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:94634200-94675200 Weak transcription Rectal Smooth Muscle rectum
21 chr1:94634400-94639400 Weak transcription A549 lung
22 chr1:94634400-94646400 Strong transcription Muscle Satellite Cultured Cells --
23 chr1:94634400-94646600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:94634400-94660400 Strong transcription NHDF-Ad bronchial
25 chr1:94634600-94639400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr1:94634600-94639400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:94634600-94662000 Strong transcription HMEC breast
28 chr1:94634800-94644400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:94634800-94645000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr1:94635000-94646800 Weak transcription Esophagus oesophagus
31 chr1:94635000-94658000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:94635200-94638800 Weak transcription Placenta Amnion Placenta Amnion
33 chr1:94635600-94639400 Weak transcription Fetal Stomach stomach
34 chr1:94635800-94646200 Strong transcription Osteobl bone
35 chr1:94636000-94639400 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr1:94636000-94658400 Strong transcription Liver Liver
37 chr1:94636200-94641000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr1:94636200-94644000 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr1:94636200-94673400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:94636600-94641200 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr1:94636600-94647400 Strong transcription Adipose Nuclei Adipose
42 chr1:94636800-94639000 Weak transcription HepG2 liver
43 chr1:94636800-94644200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:94636800-94645000 Strong transcription Skeletal Muscle Female skeletal muscle
45 chr1:94637000-94639400 Weak transcription Fetal Kidney kidney
46 chr1:94637200-94639400 Weak transcription Aorta Aorta
47 chr1:94637200-94639400 Weak transcription Lung lung
48 chr1:94637400-94639400 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr1:94637400-94639400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:94637400-94639400 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015