Variant report

Variant rs17119388
Chromosome Location chr12:57443117-57443118
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57420400-57471800 Weak transcription Gastric stomach
2 chr12:57437000-57471400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:57439200-57443400 Enhancers Fetal Thymus thymus
4 chr12:57440400-57448000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr12:57440400-57451800 Weak transcription Aorta Aorta
6 chr12:57440400-57463200 Weak transcription Brain Inferior Temporal Lobe brain
7 chr12:57440800-57444000 Enhancers Spleen Spleen
8 chr12:57440800-57444200 Weak transcription Brain Substantia Nigra brain
9 chr12:57441200-57450800 Weak transcription HSMMtube muscle
10 chr12:57441400-57445000 Enhancers Primary monocytes fromperipheralblood blood
11 chr12:57441600-57444000 Active TSS Rectal Smooth Muscle rectum
12 chr12:57441800-57443200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
13 chr12:57441800-57452600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr12:57442000-57443600 Active TSS Duodenum Smooth Muscle Duodenum
15 chr12:57442000-57444000 Active TSS Colonic Mucosa Colon
16 chr12:57442000-57444000 Active TSS Fetal Intestine Large intestine
17 chr12:57442000-57450400 Weak transcription Primary T helper cells fromperipheralblood blood
18 chr12:57442000-57450600 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr12:57442000-57450600 Weak transcription NH-A brain
20 chr12:57442000-57452000 Weak transcription Esophagus oesophagus
21 chr12:57442200-57444000 Active TSS Duodenum Mucosa Duodenum
22 chr12:57442200-57444000 Active TSS Rectal Mucosa Donor 29 rectum
23 chr12:57442200-57449800 Weak transcription Primary T cells from cord blood blood
24 chr12:57442200-57450400 Weak transcription HMEC breast
25 chr12:57442200-57450600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr12:57442200-57450600 Weak transcription K562 blood
27 chr12:57442200-57450800 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr12:57442200-57450800 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr12:57442200-57450800 Weak transcription GM12878-XiMat blood
30 chr12:57442200-57451000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr12:57442200-57451000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr12:57442200-57451200 Weak transcription Primary T killer memory cells from peripheral blood blood
33 chr12:57442200-57451800 Weak transcription HSMM muscle
34 chr12:57442200-57452200 Weak transcription Primary hematopoietic stem cells blood
35 chr12:57442200-57452200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr12:57442200-57452400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr12:57442200-57471600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr12:57442400-57450800 Weak transcription H9 Cell Line embryonic stem cell
39 chr12:57442400-57450800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr12:57442400-57450800 Weak transcription Primary T cells fromperipheralblood blood
41 chr12:57442400-57450800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr12:57442400-57450800 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr12:57442400-57451800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
44 chr12:57442400-57456200 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr12:57442400-57456800 Weak transcription Primary T killer naive cells fromperipheralblood blood
46 chr12:57442600-57444000 Active TSS Fetal Intestine Small intestine
47 chr12:57442600-57444000 Active TSS Fetal Stomach stomach
48 chr12:57442600-57450000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr12:57442600-57451200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr12:57442800-57443200 Bivalent Enhancer Placenta Placenta

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