The 2.0 version of rSNPBase

Variant report

Variant rs57056392
Chromosome Location chr12:57445987-57445988
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57420400-57471800 Weak transcription Gastric stomach
2 chr12:57437000-57471400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:57440400-57448000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr12:57440400-57451800 Weak transcription Aorta Aorta
5 chr12:57440400-57463200 Weak transcription Brain Inferior Temporal Lobe brain
6 chr12:57441200-57450800 Weak transcription HSMMtube muscle
7 chr12:57441800-57452600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr12:57442000-57450400 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr12:57442000-57450600 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr12:57442000-57450600 Weak transcription NH-A brain
11 chr12:57442000-57452000 Weak transcription Esophagus oesophagus
12 chr12:57442200-57449800 Weak transcription Primary T cells from cord blood blood
13 chr12:57442200-57450400 Weak transcription HMEC breast
14 chr12:57442200-57450600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:57442200-57450600 Weak transcription K562 blood
16 chr12:57442200-57450800 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr12:57442200-57450800 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr12:57442200-57450800 Weak transcription GM12878-XiMat blood
19 chr12:57442200-57451000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr12:57442200-57451000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr12:57442200-57451200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr12:57442200-57451800 Weak transcription HSMM muscle
23 chr12:57442200-57452200 Weak transcription Primary hematopoietic stem cells blood
24 chr12:57442200-57452200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr12:57442200-57452400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr12:57442200-57471600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr12:57442400-57450800 Weak transcription H9 Cell Line embryonic stem cell
28 chr12:57442400-57450800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr12:57442400-57450800 Weak transcription Primary T cells fromperipheralblood blood
30 chr12:57442400-57450800 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr12:57442400-57450800 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr12:57442400-57451800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr12:57442400-57456200 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr12:57442400-57456800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr12:57442600-57450000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr12:57442600-57451200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr12:57442800-57450800 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr12:57442800-57453200 Weak transcription Hela-S3 cervix
39 chr12:57443000-57449600 Weak transcription Dnd41 blood
40 chr12:57443000-57449800 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr12:57443000-57450400 Weak transcription Thymus Thymus
42 chr12:57443000-57451800 Weak transcription Lung lung
43 chr12:57443200-57452200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr12:57443400-57448400 Weak transcription Fetal Thymus thymus
45 chr12:57443800-57449200 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr12:57443800-57449600 Weak transcription Stomach Smooth Muscle stomach
47 chr12:57444000-57447800 Weak transcription A549 lung
48 chr12:57444000-57449200 Weak transcription Primary neutrophils fromperipheralblood blood
49 chr12:57444000-57450800 Weak transcription H1 Cell Line embryonic stem cell
50 chr12:57444000-57450800 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015