Variant report

Variant rs3782330
Chromosome Location chr12:57442566-57442567
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57420400-57471800 Weak transcription Gastric stomach
2 chr12:57437000-57471400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr12:57439200-57443000 Enhancers Thymus Thymus
4 chr12:57439200-57443400 Enhancers Fetal Thymus thymus
5 chr12:57440000-57442800 Enhancers Placenta Placenta
6 chr12:57440000-57443000 Enhancers Primary hematopoietic stem cells short term culture blood
7 chr12:57440400-57448000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr12:57440400-57451800 Weak transcription Aorta Aorta
9 chr12:57440400-57463200 Weak transcription Brain Inferior Temporal Lobe brain
10 chr12:57440800-57444000 Enhancers Spleen Spleen
11 chr12:57440800-57444200 Weak transcription Brain Substantia Nigra brain
12 chr12:57441000-57442600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr12:57441000-57442600 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
14 chr12:57441000-57442800 Enhancers Stomach Mucosa stomach
15 chr12:57441000-57443000 Enhancers Primary Natural Killer cells fromperipheralblood blood
16 chr12:57441200-57442600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
17 chr12:57441200-57442800 Enhancers Hela-S3 cervix
18 chr12:57441200-57450800 Weak transcription HSMMtube muscle
19 chr12:57441400-57445000 Enhancers Primary monocytes fromperipheralblood blood
20 chr12:57441600-57443000 Enhancers Dnd41 blood
21 chr12:57441600-57444000 Active TSS Rectal Smooth Muscle rectum
22 chr12:57441800-57442600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
23 chr12:57441800-57442800 Enhancers HepG2 liver
24 chr12:57441800-57443000 Weak transcription Small Intestine intestine
25 chr12:57441800-57443200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
26 chr12:57441800-57452600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr12:57442000-57442800 Enhancers Primary neutrophils fromperipheralblood blood
28 chr12:57442000-57443600 Active TSS Duodenum Smooth Muscle Duodenum
29 chr12:57442000-57444000 Active TSS Colonic Mucosa Colon
30 chr12:57442000-57444000 Active TSS Fetal Intestine Large intestine
31 chr12:57442000-57450400 Weak transcription Primary T helper cells fromperipheralblood blood
32 chr12:57442000-57450600 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr12:57442000-57450600 Weak transcription NH-A brain
34 chr12:57442000-57452000 Weak transcription Esophagus oesophagus
35 chr12:57442200-57442800 Enhancers Monocytes-CD14+_RO01746 blood
36 chr12:57442200-57444000 Active TSS Duodenum Mucosa Duodenum
37 chr12:57442200-57444000 Active TSS Rectal Mucosa Donor 29 rectum
38 chr12:57442200-57449800 Weak transcription Primary T cells from cord blood blood
39 chr12:57442200-57450400 Weak transcription HMEC breast
40 chr12:57442200-57450600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr12:57442200-57450600 Weak transcription K562 blood
42 chr12:57442200-57450800 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr12:57442200-57450800 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr12:57442200-57450800 Weak transcription GM12878-XiMat blood
45 chr12:57442200-57451000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr12:57442200-57451000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr12:57442200-57451200 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr12:57442200-57451800 Weak transcription HSMM muscle
49 chr12:57442200-57452200 Weak transcription Primary hematopoietic stem cells blood
50 chr12:57442200-57452200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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