The 2.0 version of rSNPBase

Variant report

Variant rs58298943
Chromosome Location chr12:57391292-57391293
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57377000-57395200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr12:57380000-57391400 Weak transcription Fetal Intestine Large intestine
3 chr12:57381400-57393800 Weak transcription Rectal Smooth Muscle rectum
4 chr12:57381400-57395400 Weak transcription Placenta Amnion Placenta Amnion
5 chr12:57381400-57396400 Weak transcription HMEC breast
6 chr12:57381800-57392600 Weak transcription Primary T helper naive cells from peripheral blood blood
7 chr12:57381800-57393400 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr12:57381800-57393400 Weak transcription Pancreas Pancrea
9 chr12:57381800-57395200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr12:57381800-57396400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr12:57381800-57397000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr12:57382000-57392000 Weak transcription HUES48 Cell Line embryonic stem cell
13 chr12:57382000-57392400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr12:57382600-57393000 Weak transcription H1 Cell Line embryonic stem cell
15 chr12:57382600-57393200 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr12:57383000-57391400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr12:57383000-57391800 Weak transcription A549 lung
18 chr12:57383000-57393600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr12:57383200-57394400 Weak transcription Hela-S3 cervix
20 chr12:57383200-57398800 Weak transcription Fetal Heart heart
21 chr12:57385400-57391800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr12:57385400-57393600 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr12:57385400-57394000 Weak transcription NH-A brain
24 chr12:57385400-57395400 Weak transcription Stomach Mucosa stomach
25 chr12:57385400-57396000 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr12:57385600-57391400 Weak transcription Primary B cells from cord blood blood
27 chr12:57385600-57391600 Weak transcription Primary T helper cells fromperipheralblood blood
28 chr12:57385600-57391800 Weak transcription Right Atrium heart
29 chr12:57385600-57392000 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr12:57385600-57392800 Weak transcription NHEK skin
31 chr12:57385600-57393400 Weak transcription Left Ventricle heart
32 chr12:57385600-57393800 Weak transcription Brain Cingulate Gyrus brain
33 chr12:57385600-57394200 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr12:57385600-57394200 Weak transcription Ovary ovary
35 chr12:57385600-57396200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr12:57385800-57391400 Weak transcription Primary hematopoietic stem cells blood
37 chr12:57385800-57391400 Weak transcription Fetal Thymus thymus
38 chr12:57385800-57391600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr12:57385800-57393800 Weak transcription Primary monocytes fromperipheralblood blood
40 chr12:57385800-57394000 Weak transcription ES-I3 Cell Line embryonic stem cell
41 chr12:57385800-57394000 Weak transcription Colon Smooth Muscle Colon
42 chr12:57385800-57395200 Weak transcription iPS-15b Cell Line embryonic stem cell
43 chr12:57386000-57393000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr12:57386000-57393800 Weak transcription HepG2 liver
45 chr12:57386000-57395400 Weak transcription HUVEC blood vessel
46 chr12:57386200-57392000 Weak transcription GM12878-XiMat blood
47 chr12:57387000-57394200 Weak transcription NHLF lung
48 chr12:57387400-57392400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr12:57387400-57393400 Weak transcription Placenta Placenta
50 chr12:57387600-57391600 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015