The 2.0 version of rSNPBase

Variant report

Variant rs73131120
Chromosome Location chr12:57387986-57387987
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:57361800-57389000 Weak transcription Aorta Aorta
2 chr12:57373200-57388600 Weak transcription Fetal Brain Female brain
3 chr12:57373200-57388800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr12:57377000-57395200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr12:57380000-57391400 Weak transcription Fetal Intestine Large intestine
6 chr12:57381400-57388800 Weak transcription Brain Germinal Matrix brain
7 chr12:57381400-57389000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr12:57381400-57389000 Weak transcription Thymus Thymus
9 chr12:57381400-57393800 Weak transcription Rectal Smooth Muscle rectum
10 chr12:57381400-57395400 Weak transcription Placenta Amnion Placenta Amnion
11 chr12:57381400-57396400 Weak transcription HMEC breast
12 chr12:57381600-57388400 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr12:57381800-57388800 Weak transcription Stomach Smooth Muscle stomach
14 chr12:57381800-57389000 Weak transcription Brain Angular Gyrus brain
15 chr12:57381800-57389200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr12:57381800-57389800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr12:57381800-57390800 Weak transcription Dnd41 blood
18 chr12:57381800-57391000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr12:57381800-57392600 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr12:57381800-57393400 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr12:57381800-57393400 Weak transcription Pancreas Pancrea
22 chr12:57381800-57395200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr12:57381800-57396400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr12:57381800-57397000 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr12:57382000-57389000 Weak transcription Brain Inferior Temporal Lobe brain
26 chr12:57382000-57392000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr12:57382000-57392400 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr12:57382400-57389000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr12:57382600-57388800 Weak transcription Fetal Intestine Small intestine
30 chr12:57382600-57389000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr12:57382600-57393000 Weak transcription H1 Cell Line embryonic stem cell
32 chr12:57382600-57393200 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr12:57383000-57391400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr12:57383000-57391800 Weak transcription A549 lung
35 chr12:57383000-57393600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr12:57383200-57390800 Weak transcription HSMM muscle
37 chr12:57383200-57394400 Weak transcription Hela-S3 cervix
38 chr12:57383200-57398800 Weak transcription Fetal Heart heart
39 chr12:57384200-57388200 Enhancers Liver Liver
40 chr12:57385000-57390800 Weak transcription HSMMtube muscle
41 chr12:57385200-57389000 Weak transcription Brain Anterior Caudate brain
42 chr12:57385200-57389000 Weak transcription Gastric stomach
43 chr12:57385200-57389000 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr12:57385400-57389000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr12:57385400-57389200 Weak transcription Brain Substantia Nigra brain
46 chr12:57385400-57390000 Weak transcription Primary B cells from peripheral blood blood
47 chr12:57385400-57391800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr12:57385400-57393600 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr12:57385400-57394000 Weak transcription NH-A brain
50 chr12:57385400-57395400 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015