Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs13187234	1.00[EUR][1000 genomes]
rs17136271	1.00[EUR][1000 genomes]
rs17136278	1.00[EUR][1000 genomes]
rs2974457	1.00[EUR][1000 genomes]
rs56823850	1.00[EUR][1000 genomes]
rs57178641	1.00[EUR][1000 genomes]
rs61188125	0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6867558	1.00[EUR][1000 genomes]
rs6876006	1.00[EUR][1000 genomes]
rs6881490	1.00[EUR][1000 genomes]
rs6885474	1.00[EUR][1000 genomes]
rs6885883	1.00[EUR][1000 genomes]
rs73243066	1.00[EUR][1000 genomes]
rs73243069	1.00[EUR][1000 genomes]
rs73256306	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73256373	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73779586	1.00[EUR][1000 genomes]
rs73779601	1.00[EUR][1000 genomes]
rs73782123	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7703903	1.00[EUR][1000 genomes]
rs7716446	1.00[EUR][1000 genomes]
rs7724198	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471042	chr5:113160490-113440892	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113342200-113344200	Enhancers	Fetal Brain Male	brain
2	chr5:113342200-113344400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr5:113342200-113348000	Weak transcription	Ovary	ovary

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