Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:113305896..113307463-chr5:113310563..113313169,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs13187234	1.00[EUR][1000 genomes]
rs17136194	1.00[EUR][1000 genomes]
rs17136271	1.00[EUR][1000 genomes]
rs17136278	1.00[EUR][1000 genomes]
rs2974457	1.00[EUR][1000 genomes]
rs57178641	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61188125	1.00[EUR][1000 genomes]
rs6867558	1.00[EUR][1000 genomes]
rs6876006	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6881490	1.00[EUR][1000 genomes]
rs6885474	1.00[EUR][1000 genomes]
rs6885883	1.00[EUR][1000 genomes]
rs6894745	0.82[AFR][1000 genomes]
rs73243066	1.00[EUR][1000 genomes]
rs73243069	1.00[EUR][1000 genomes]
rs73256306	1.00[EUR][1000 genomes]
rs73256373	1.00[EUR][1000 genomes]
rs73779586	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73779601	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73782123	1.00[EUR][1000 genomes]
rs7703903	1.00[EUR][1000 genomes]
rs7716446	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7724198	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471042	chr5:113160490-113440892	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv980714	chr5:113301277-113321673	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:113304600-113307000	Enhancers	Brain Germinal Matrix	brain
2	chr5:113305600-113307400	Enhancers	Fetal Heart	heart

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