Variant report
| Variant | rs17153840 |
|---|---|
| Chromosome Location | chr11:59267371-59267372 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:17)
| rs_ID | r2[population] |
|---|---|
| rs1139126 | 1.00[AMR][1000 genomes] |
| rs17153833 | 1.00[YRI][hapmap] |
| rs17153848 | 1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17153853 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs17153905 | 1.00[AMR][1000 genomes] |
| rs17153923 | 1.00[AMR][1000 genomes] |
| rs34682137 | 1.00[AMR][1000 genomes] |
| rs58646788 | 1.00[AMR][1000 genomes] |
| rs60695388 | 1.00[AMR][1000 genomes] |
| rs7120632 | 0.85[YRI][hapmap] |
| rs7125274 | 1.00[AMR][1000 genomes] |
| rs7926408 | 1.00[AMR][1000 genomes] |
| rs7930912 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7931157 | 1.00[AMR][1000 genomes] |
| rs7938530 | 1.00[AMR][1000 genomes] |
| rs7947985 | 1.00[AMR][1000 genomes] |
| rs7951531 | 1.00[AMR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1046084 | chr11:59034871-59314519 | Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 24 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
