Variant report

Variant	rs60695388
Chromosome Location	chr11:59358544-59358545
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:59357778..59359857-chr11:59379899..59383236,3	K562	blood:
2	chr11:59358338..59361390-chr11:59376004..59379219,3	K562	blood:
3	chr11:59354189..59356140-chr11:59358099..59360988,3	K562	blood:
4	chr11:59353932..59356058-chr11:59357953..59360980,3	K562	blood:

rs_ID	r²[population]
rs1139126	1.00[AMR][1000 genomes]
rs11820677	1.00[EUR][1000 genomes]
rs11820756	1.00[EUR][1000 genomes]
rs11825352	1.00[EUR][1000 genomes]
rs11825669	1.00[EUR][1000 genomes]
rs11825989	1.00[EUR][1000 genomes]
rs11826485	1.00[EUR][1000 genomes]
rs12278199	1.00[EUR][1000 genomes]
rs12278334	1.00[EUR][1000 genomes]
rs17153848	1.00[AMR][1000 genomes]
rs17153853	1.00[AMR][1000 genomes]
rs17153905	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17153923	1.00[AMR][1000 genomes]
rs34682137	1.00[AMR][1000 genomes]
rs58646788	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60278978	0.93[AFR][1000 genomes]
rs61443200	1.00[EUR][1000 genomes]
rs7102219	1.00[EUR][1000 genomes]
rs7104228	1.00[EUR][1000 genomes]
rs7107349	1.00[EUR][1000 genomes]
rs7112903	1.00[EUR][1000 genomes]
rs7113230	0.87[EUR][1000 genomes]
rs7125274	1.00[AMR][1000 genomes]
rs7126329	1.00[EUR][1000 genomes]
rs7126712	1.00[EUR][1000 genomes]
rs7926408	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7930912	1.00[AMR][1000 genomes]
rs7931157	1.00[AMR][1000 genomes]
rs7938530	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7947985	1.00[AMR][1000 genomes]
rs7951531	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59334200-59366200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr11:59334200-59382000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr11:59340800-59378200	Strong transcription	Fetal Thymus	thymus
4	chr11:59342000-59379000	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr11:59342200-59378200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
6	chr11:59343600-59378400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr11:59343800-59382000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr11:59344000-59360400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr11:59346200-59360400	Weak transcription	Esophagus	oesophagus
10	chr11:59346200-59360400	Weak transcription	Right Ventricle	heart
11	chr11:59346200-59361000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
12	chr11:59346600-59360400	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr11:59347600-59359800	Weak transcription	Spleen	Spleen
14	chr11:59349000-59359400	Weak transcription	Brain Angular Gyrus	brain
15	chr11:59350000-59360400	Weak transcription	Gastric	stomach
16	chr11:59350200-59360800	Weak transcription	Stomach Mucosa	stomach
17	chr11:59350200-59361000	Weak transcription	Psoas Muscle	Psoas
18	chr11:59350200-59378200	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr11:59350400-59360600	Weak transcription	NHLF	lung
20	chr11:59351400-59371400	Strong transcription	Primary T helper cells fromperipheralblood	blood
21	chr11:59351800-59369000	Strong transcription	Placenta	Placenta
22	chr11:59352000-59359600	Weak transcription	Brain Cingulate Gyrus	brain
23	chr11:59352000-59360400	Weak transcription	Pancreas	Pancrea
24	chr11:59352200-59371200	Strong transcription	Primary T cells fromperipheralblood	blood
25	chr11:59352400-59359400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
26	chr11:59352400-59359400	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr11:59352400-59359400	Weak transcription	Colon Smooth Muscle	Colon
28	chr11:59352400-59360600	Weak transcription	Fetal Heart	heart
29	chr11:59352400-59369200	Strong transcription	Primary neutrophils fromperipheralblood	blood
30	chr11:59352400-59378000	Strong transcription	Sigmoid Colon	Sigmoid Colon
31	chr11:59352600-59359400	Weak transcription	Pancreatic Islets	Pancreatic Islet
32	chr11:59352600-59378200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr11:59352800-59378400	Strong transcription	Primary monocytes fromperipheralblood	blood
34	chr11:59353000-59368600	Strong transcription	Liver	Liver
35	chr11:59353000-59371200	Strong transcription	Left Ventricle	heart
36	chr11:59353200-59377800	Strong transcription	Fetal Muscle Trunk	muscle
37	chr11:59353200-59378200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr11:59353200-59378400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
39	chr11:59353400-59378000	Strong transcription	Fetal Intestine Large	intestine
40	chr11:59353400-59378200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr11:59353400-59378200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
42	chr11:59353400-59378800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
43	chr11:59353600-59359200	Weak transcription	Colonic Mucosa	Colon
44	chr11:59353600-59359400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr11:59353600-59378200	Strong transcription	HUES6 Cell Line	embryonic stem cell
46	chr11:59353600-59378600	Strong transcription	Monocytes-CD14+_RO01746	blood
47	chr11:59353800-59363800	Strong transcription	Adipose Nuclei	Adipose
48	chr11:59353800-59378200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
49	chr11:59353800-59378200	Strong transcription	Duodenum Mucosa	Duodenum
50	chr11:59353800-59378400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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