The 2.0 version of rSNPBase

Variant report

Variant rs17159890
Chromosome Location chr1:146628374-146628375
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146618800-146628800 Weak transcription Lung lung
2 chr1:146618800-146628800 Weak transcription Spleen Spleen
3 chr1:146619200-146630600 Weak transcription Gastric stomach
4 chr1:146621600-146629400 Weak transcription NHDF-Ad bronchial
5 chr1:146622800-146630000 Weak transcription Small Intestine intestine
6 chr1:146623000-146628800 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr1:146623200-146629000 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr1:146623200-146629200 Weak transcription Brain Angular Gyrus brain
9 chr1:146623200-146629400 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:146623200-146629600 Weak transcription Fetal Brain Male brain
11 chr1:146623400-146629200 Weak transcription Fetal Lung lung
12 chr1:146623400-146630400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr1:146623400-146630600 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr1:146623800-146628800 Weak transcription Fetal Stomach stomach
15 chr1:146623800-146629000 Weak transcription Primary hematopoietic stem cells short term culture blood
16 chr1:146623800-146629000 Weak transcription Brain Substantia Nigra brain
17 chr1:146623800-146629400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:146623800-146629600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:146624000-146628800 Weak transcription Colon Smooth Muscle Colon
20 chr1:146624000-146629000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:146624000-146629000 Weak transcription Fetal Brain Female brain
22 chr1:146624000-146629400 Weak transcription Thymus Thymus
23 chr1:146624000-146630600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:146624000-146631800 Weak transcription Esophagus oesophagus
25 chr1:146624200-146629800 Weak transcription GM12878-XiMat blood
26 chr1:146624200-146632800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:146624200-146637600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr1:146624400-146630400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:146624400-146636000 Strong transcription Skeletal Muscle Female skeletal muscle
30 chr1:146624600-146629200 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr1:146624600-146630600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr1:146624600-146632200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:146624600-146634400 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:146624600-146639600 Strong transcription Primary T cells from cord blood blood
35 chr1:146624600-146640400 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr1:146624800-146628800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:146624800-146629400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:146624800-146629600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr1:146624800-146630000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr1:146624800-146632800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr1:146624800-146635000 Strong transcription Primary B cells from cord blood blood
42 chr1:146624800-146637600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:146624800-146642600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:146625000-146630200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr1:146625000-146634200 Strong transcription Adipose Nuclei Adipose
46 chr1:146625000-146638400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr1:146625000-146638400 Strong transcription Duodenum Mucosa Duodenum
48 chr1:146625200-146628800 Weak transcription Hela-S3 cervix
49 chr1:146625200-146632800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:146625200-146633800 Strong transcription Breast Myoepithelial Primary Cells Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015