The 2.0 version of rSNPBase

Variant report

Variant rs72706497
Chromosome Location chr1:146641352-146641353
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146624800-146642600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:146631600-146642800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:146632000-146642400 Weak transcription Colonic Mucosa Colon
4 chr1:146632000-146642600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:146632200-146642400 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:146632200-146642800 Weak transcription Gastric stomach
7 chr1:146632200-146643200 Weak transcription Spleen Spleen
8 chr1:146632400-146642000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr1:146632400-146642000 Weak transcription Fetal Brain Male brain
10 chr1:146632400-146642200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:146632600-146643000 Weak transcription Lung lung
12 chr1:146632800-146642400 Weak transcription Fetal Kidney kidney
13 chr1:146633000-146641400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr1:146633200-146641400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr1:146633200-146641800 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr1:146633400-146642400 Weak transcription Thymus Thymus
17 chr1:146633400-146642600 Weak transcription Aorta Aorta
18 chr1:146633600-146642200 Weak transcription Left Ventricle heart
19 chr1:146633600-146642400 Weak transcription Psoas Muscle Psoas
20 chr1:146633800-146642600 Weak transcription Brain Substantia Nigra brain
21 chr1:146634400-146642600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
22 chr1:146634400-146642600 Weak transcription Fetal Thymus thymus
23 chr1:146634600-146642000 Weak transcription Right Ventricle heart
24 chr1:146635400-146642400 Weak transcription Brain Angular Gyrus brain
25 chr1:146637600-146641400 Enhancers Fetal Intestine Small intestine
26 chr1:146638000-146642400 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:146638400-146641400 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:146638400-146641400 Enhancers HMEC breast
29 chr1:146638400-146642400 Enhancers Hela-S3 cervix
30 chr1:146638600-146642000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr1:146638600-146642200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:146638600-146642200 Weak transcription Adipose Nuclei Adipose
33 chr1:146638600-146642200 Weak transcription Fetal Muscle Leg muscle
34 chr1:146638600-146642200 Weak transcription Pancreas Pancrea
35 chr1:146638600-146642400 Enhancers Fetal Intestine Large intestine
36 chr1:146638600-146642800 Weak transcription Esophagus oesophagus
37 chr1:146638800-146641800 Weak transcription Brain Cingulate Gyrus brain
38 chr1:146638800-146642200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:146638800-146642600 Enhancers Rectal Mucosa Donor 31 rectum
40 chr1:146639000-146641600 Enhancers Muscle Satellite Cultured Cells --
41 chr1:146639000-146641800 Enhancers NHDF-Ad bronchial
42 chr1:146639000-146642200 Weak transcription Primary hematopoietic stem cells blood
43 chr1:146639000-146642600 Weak transcription Primary neutrophils fromperipheralblood blood
44 chr1:146639000-146642600 Enhancers HSMM muscle
45 chr1:146639200-146642200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr1:146639200-146642400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:146639400-146641400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:146639400-146641800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr1:146639400-146641800 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr1:146639400-146642000 Enhancers Colon Smooth Muscle Colon

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Last update: Aug 31, 2015