Variant report

Variant	rs72706502
Chromosome Location	chr1:146641848-146641849
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr1:146641651-146642047	MCF10A-Er-Src	breast:	n/a	n/a
2	FOS	chr1:146641440-146642109	MCF10A-Er-Src	breast:	n/a	chr1:146641982-146641990 chr1:146641983-146641990 chr1:146641981-146641991 chr1:146641982-146641990
3	MAFK	chr1:146641456-146642170	HepG2	liver:	n/a	chr1:146641726-146641737 chr1:146641981-146641996 chr1:146641663-146641674 chr1:146641976-146641996 chr1:146641983-146641992 chr1:146641980-146641990 chr1:146641663-146641674
4	MAFK	chr1:146641594-146642121	IMR90	lung:	n/a	chr1:146641726-146641737 chr1:146641981-146641996 chr1:146641663-146641674 chr1:146641976-146641996 chr1:146641983-146641992 chr1:146641980-146641990 chr1:146641663-146641674
5	MYC	chr1:146641455-146644653	MCF10A-Er-Src	breast:	n/a	chr1:146641486-146641496 chr1:146641981-146641990
6	MAFK	chr1:146641474-146642145	K562	blood:	n/a	chr1:146641726-146641737 chr1:146641981-146641996 chr1:146641663-146641674 chr1:146641976-146641996 chr1:146641983-146641992 chr1:146641980-146641990 chr1:146641663-146641674
7	FOS	chr1:146641606-146642095	MCF10A-Er-Src	breast:	n/a	chr1:146641982-146641990 chr1:146641983-146641990 chr1:146641981-146641991 chr1:146641982-146641990
8	FOS	chr1:146641532-146642175	MCF10A-Er-Src	breast:	n/a	chr1:146641982-146641990 chr1:146641983-146641990 chr1:146641981-146641991 chr1:146641982-146641990
9	MAFK	chr1:146641491-146642151	HepG2	liver:	n/a	chr1:146641726-146641737 chr1:146641981-146641996 chr1:146641663-146641674 chr1:146641976-146641996 chr1:146641983-146641992 chr1:146641980-146641990 chr1:146641663-146641674
10	POLR2A	chr1:146641592-146641999	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:146638044..146647556-chr1:146707628..146717159,48	MCF-7	breast:
2	chr1:146632461..146635093-chr1:146640314..146642017,2	K562	blood:
3	chr1:146638562..146647588-chr1:146711453..146720391,22	K562	blood:
4	chr1:146553836..146557884-chr1:146641755..146644199,5	MCF-7	breast:
5	chr1:146554115..146557849-chr1:146637949..146646936,17	MCF-7	breast:
6	chr1:146554089..146558005-chr1:146638440..146645674,16	K562	blood:
7	chr1:146580735..146583076-chr1:146639979..146642635,2	MCF-7	breast:
8	chr1:146628338..146632381-chr1:146638568..146643066,4	K562	blood:
9	chr1:146554089..146558005-chr1:146640920..146646223,16	K562	blood:
10	chr1:146639294..146641009-chr1:146641764..146644028,3	K562	blood:
11	chr1:146637222..146651713-chr1:146712141..146718911,44	MCF-7	breast:
12	chr1:146640645..146647502-chr1:146711418..146719354,29	K562	blood:

Variant related genes	Relation type
ENSG00000273071	TF binding region
ENSG00000237188	TF binding region
ENSG00000131778	Chromatin interaction
ENSG00000131791	Chromatin interaction
ENSG00000131781	Chromatin interaction
ENSG00000230832	Chromatin interaction

Extended variants
information (count: 194 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:174)

rs_ID	r²[population]
rs10494242	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10494243	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17159869	0.91[AMR][1000 genomes]
rs17159878	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17159880	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17159882	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17159883	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17159890	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17159909	0.91[AMR][1000 genomes]
rs17160790	0.91[AMR][1000 genomes]
rs17355733	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355740	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355768	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355789	0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17355796	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355817	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355844	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355858	0.85[AFR][1000 genomes];0.96[EUR][1000 genomes]
rs17355899	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355913	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355927	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17355962	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17355969	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17356024	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17356031	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17359851	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17359865	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17359879	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17360003	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17360031	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17360059	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17360066	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381176	0.92[EUR][1000 genomes]
rs28381180	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28381181	0.85[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs28381183	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381188	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381190	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381192	0.86[EUR][1000 genomes]
rs28381193	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs28381194	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381195	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381200	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381203	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381204	1.00[EUR][1000 genomes]
rs28381205	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381206	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381209	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381225	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28381230	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34838459	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41295821	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41312712	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41480846	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55653839	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55701100	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55705039	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55710129	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55797044	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55888723	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs56004039	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56017341	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56047816	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56053798	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56074784	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56079929	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56163155	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56175228	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56182581	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56400874	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56410162	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56743621	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56833520	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57211600	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57247303	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57570045	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58423612	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58785568	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs59665085	1.00[EUR][1000 genomes]
rs60280517	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60603428	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61374973	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61549987	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62623392	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62623395	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6658465	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6659191	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6660848	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6663107	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6665580	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6665934	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6668865	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6674519	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6674643	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6678588	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6679406	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6681389	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6684454	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6690541	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6700135	0.85[AFR][1000 genomes]
rs72691021	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72691048	0.92[EUR][1000 genomes]
rs72692977	0.85[EUR][1000 genomes]
rs72706446	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706447	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706448	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706449	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706450	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706451	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706452	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706453	1.00[EUR][1000 genomes]
rs72706456	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72706457	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706465	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706469	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706474	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706496	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706497	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72706499	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72706501	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708503	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708504	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708505	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708508	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708509	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708510	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708511	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708514	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708515	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708517	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708518	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72708519	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708520	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708521	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708526	0.91[AMR][1000 genomes]
rs72708527	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708529	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708530	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708535	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708537	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708538	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708539	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708544	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708545	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708547	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708548	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708553	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708554	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708555	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708556	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708558	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708563	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72708564	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72708565	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708569	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708571	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708573	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708581	0.92[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72708582	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72708584	0.84[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs72708586	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708592	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708595	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708598	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72708600	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74119827	0.84[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7519713	0.92[EUR][1000 genomes]
rs7520476	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7528172	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7532458	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7541245	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7547138	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7547698	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7556347	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757753	chr1:145883119-146697542	Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	96 gene(s)	inside rSNPs	diseases
2	nsv872251	chr1:146152553-146803630	Weak transcription Bivalent Enhancer Strong transcription Enhancers Active TSS Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	95 gene(s)	inside rSNPs	diseases
3	nsv872252	chr1:146471863-147398135	Weak transcription Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	112 gene(s)	inside rSNPs	diseases
4	nsv999546	chr1:146507577-147356574	Weak transcription Genic enhancers Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
5	nsv535123	chr1:146507577-147356574	Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
6	nsv492188	chr1:146507649-147381479	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
7	nsv916754	chr1:146507711-147417736	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	113 gene(s)	inside rSNPs	diseases
8	nsv547673	chr1:146510112-147398135	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
9	nsv547674	chr1:146522722-147396797	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	111 gene(s)	inside rSNPs	diseases
10	nsv998341	chr1:146531446-147384720	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
11	nsv535124	chr1:146531446-147384720	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
12	nsv1003493	chr1:146531446-147389944	Weak transcription Flanking Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
13	nsv998209	chr1:146543722-147384720	Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
14	nsv535126	chr1:146543722-147384720	Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	110 gene(s)	inside rSNPs	diseases
15	nsv872255	chr1:146550780-146969712	Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	93 gene(s)	inside rSNPs	diseases
16	nsv872256	chr1:146556596-147410973	Flanking Active TSS Weak transcription Enhancers Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	77 gene(s)	inside rSNPs	diseases
17	nsv1012331	chr1:146603479-147384720	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
18	nsv535131	chr1:146603479-147384720	Genic enhancers Strong transcription Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
19	nsv1009943	chr1:146618929-146893851	Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Strong transcription Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
20	nsv535132	chr1:146618929-146893851	Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:146624800-146642600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:146631600-146642800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:146632000-146642400	Weak transcription	Colonic Mucosa	Colon
4	chr1:146632000-146642600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr1:146632200-146642400	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr1:146632200-146642800	Weak transcription	Gastric	stomach
7	chr1:146632200-146643200	Weak transcription	Spleen	Spleen
8	chr1:146632400-146642000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
9	chr1:146632400-146642000	Weak transcription	Fetal Brain Male	brain
10	chr1:146632400-146642200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr1:146632600-146643000	Weak transcription	Lung	lung
12	chr1:146632800-146642400	Weak transcription	Fetal Kidney	kidney
13	chr1:146633400-146642400	Weak transcription	Thymus	Thymus
14	chr1:146633400-146642600	Weak transcription	Aorta	Aorta
15	chr1:146633600-146642200	Weak transcription	Left Ventricle	heart
16	chr1:146633600-146642400	Weak transcription	Psoas Muscle	Psoas
17	chr1:146633800-146642600	Weak transcription	Brain Substantia Nigra	brain
18	chr1:146634400-146642600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
19	chr1:146634400-146642600	Weak transcription	Fetal Thymus	thymus
20	chr1:146634600-146642000	Weak transcription	Right Ventricle	heart
21	chr1:146635400-146642400	Weak transcription	Brain Angular Gyrus	brain
22	chr1:146638000-146642400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
23	chr1:146638400-146642400	Enhancers	Hela-S3	cervix
24	chr1:146638600-146642000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
25	chr1:146638600-146642200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chr1:146638600-146642200	Weak transcription	Adipose Nuclei	Adipose
27	chr1:146638600-146642200	Weak transcription	Fetal Muscle Leg	muscle
28	chr1:146638600-146642200	Weak transcription	Pancreas	Pancrea
29	chr1:146638600-146642400	Enhancers	Fetal Intestine Large	intestine
30	chr1:146638600-146642800	Weak transcription	Esophagus	oesophagus
31	chr1:146638800-146642200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
32	chr1:146638800-146642600	Enhancers	Rectal Mucosa Donor 31	rectum
33	chr1:146639000-146642200	Weak transcription	Primary hematopoietic stem cells	blood
34	chr1:146639000-146642600	Weak transcription	Primary neutrophils fromperipheralblood	blood
35	chr1:146639000-146642600	Enhancers	HSMM	muscle
36	chr1:146639200-146642200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
37	chr1:146639200-146642400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
38	chr1:146639400-146642000	Enhancers	Colon Smooth Muscle	Colon
39	chr1:146639400-146642000	Weak transcription	Ovary	ovary
40	chr1:146639400-146642000	Enhancers	A549	lung
41	chr1:146639400-146642400	Weak transcription	Primary B cells from cord blood	blood
42	chr1:146639400-146642400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
43	chr1:146639600-146642000	Weak transcription	Skeletal Muscle Female	skeletal muscle
44	chr1:146639600-146642200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr1:146639600-146642200	Weak transcription	Primary T cells fromperipheralblood	blood
46	chr1:146639600-146642200	Weak transcription	Fetal Muscle Trunk	muscle
47	chr1:146639600-146642400	Weak transcription	Primary monocytes fromperipheralblood	blood
48	chr1:146639600-146642400	Weak transcription	Primary B cells from peripheral blood	blood
49	chr1:146639600-146642400	Weak transcription	Primary T cells from cord blood	blood
50	chr1:146639600-146642400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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