Variant report

Variant rs17180058
Chromosome Location chr6:29934152-29934153
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:120 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29916800-29940200 Weak transcription Gastric stomach
2 chr6:29927800-29938800 Weak transcription Spleen Spleen
3 chr6:29932000-29934200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr6:29932200-29934200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr6:29932200-29934200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
6 chr6:29932200-29934200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
7 chr6:29932200-29934200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr6:29932200-29934200 Flanking Active TSS Adipose Nuclei Adipose
9 chr6:29932200-29934200 Flanking Active TSS Colon Smooth Muscle Colon
10 chr6:29932200-29934200 Flanking Active TSS HMEC breast
11 chr6:29932200-29934400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
12 chr6:29932200-29934400 Flanking Active TSS Primary B cells from cord blood blood
13 chr6:29932200-29934600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr6:29932200-29934600 Flanking Active TSS Muscle Satellite Cultured Cells --
15 chr6:29932200-29934600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
16 chr6:29932200-29934600 Flanking Active TSS Dnd41 blood
17 chr6:29932200-29934800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
18 chr6:29932200-29934800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr6:29932200-29934800 Enhancers Primary B cells from peripheral blood blood
20 chr6:29932200-29934800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
21 chr6:29932200-29935600 Enhancers Fetal Lung lung
22 chr6:29932200-29936200 Enhancers Fetal Intestine Small intestine
23 chr6:29932400-29934200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
24 chr6:29932400-29934200 Flanking Active TSS Brain Hippocampus Middle brain
25 chr6:29932400-29934200 Flanking Active TSS HUVEC blood vessel
26 chr6:29932400-29934200 Flanking Active TSS NHEK skin
27 chr6:29932400-29934400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr6:29932400-29934400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
29 chr6:29932400-29935000 Flanking Active TSS Duodenum Mucosa Duodenum
30 chr6:29932400-29935000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
31 chr6:29932600-29934200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr6:29932600-29934200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr6:29932600-29934200 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr6:29932600-29934200 Active TSS A549 lung
35 chr6:29932600-29934200 Flanking Active TSS NHLF lung
36 chr6:29932600-29934200 Flanking Active TSS Osteobl bone
37 chr6:29932600-29934400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
38 chr6:29932600-29934400 Flanking Active TSS Brain Anterior Caudate brain
39 chr6:29932600-29934600 Flanking Active TSS Liver Liver
40 chr6:29932600-29934600 Active TSS Thymus Thymus
41 chr6:29932600-29935400 Active TSS Right Ventricle heart
42 chr6:29932600-29935600 Active TSS K562 blood
43 chr6:29932600-29935800 Enhancers Fetal Kidney kidney
44 chr6:29932800-29934200 Flanking Active TSS Primary T cells fromperipheralblood blood
45 chr6:29932800-29934200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
46 chr6:29932800-29934200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr6:29932800-29934200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
48 chr6:29932800-29934200 Flanking Active TSS Colonic Mucosa Colon
49 chr6:29932800-29934200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
50 chr6:29932800-29934400 Flanking Active TSS iPS-20b Cell Line embryonic stem cell

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