Variant report

Variant rs56402621
Chromosome Location chr6:29935721-29935722
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29916800-29940200 Weak transcription Gastric stomach
2 chr6:29927800-29938800 Weak transcription Spleen Spleen
3 chr6:29932200-29936200 Enhancers Fetal Intestine Small intestine
4 chr6:29932600-29935800 Enhancers Fetal Kidney kidney
5 chr6:29933200-29936200 Enhancers H1 Cell Line embryonic stem cell
6 chr6:29933200-29936400 Enhancers Fetal Heart heart
7 chr6:29933200-29937400 Weak transcription Placenta Amnion Placenta Amnion
8 chr6:29933400-29937200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr6:29933600-29935800 Enhancers Cortex derived primary cultured neurospheres brain
10 chr6:29933600-29942400 Weak transcription Lung lung
11 chr6:29933800-29936400 Enhancers Fetal Muscle Leg muscle
12 chr6:29933800-29936600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr6:29934000-29935800 Enhancers Pancreatic Islets Pancreatic Islet
14 chr6:29934000-29936000 Enhancers Primary monocytes fromperipheralblood blood
15 chr6:29934000-29936200 Enhancers Primary hematopoietic stem cells blood
16 chr6:29934000-29936200 Enhancers NHDF-Ad bronchial
17 chr6:29934000-29936400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:29934000-29936400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:29934200-29935800 Enhancers Primary T helper naive cells from peripheral blood blood
20 chr6:29934200-29935800 Enhancers Primary T helper naive cells fromperipheralblood blood
21 chr6:29934200-29935800 Enhancers HSMMtube muscle
22 chr6:29934200-29936000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr6:29934200-29936000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr6:29934200-29936000 Enhancers Brain Hippocampus Middle brain
25 chr6:29934200-29936000 Weak transcription Pancreas Pancrea
26 chr6:29934200-29936200 Enhancers Primary hematopoietic stem cells short term culture blood
27 chr6:29934200-29936200 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr6:29934200-29936200 Enhancers Primary T killer naive cells fromperipheralblood blood
29 chr6:29934200-29936200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr6:29934200-29936200 Enhancers Stomach Smooth Muscle stomach
31 chr6:29934200-29936200 Enhancers NHLF lung
32 chr6:29934200-29936200 Enhancers Osteobl bone
33 chr6:29934200-29936400 Enhancers Adipose Nuclei Adipose
34 chr6:29934200-29936400 Enhancers Rectal Mucosa Donor 31 rectum
35 chr6:29934200-29936400 Enhancers Stomach Mucosa stomach
36 chr6:29934200-29936600 Enhancers Breast Myoepithelial Primary Cells Breast
37 chr6:29934200-29936600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr6:29934200-29936600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr6:29934200-29936600 Enhancers HSMM muscle
40 chr6:29934200-29936600 Enhancers NHEK skin
41 chr6:29934200-29937200 Enhancers HMEC breast
42 chr6:29934200-29939800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
43 chr6:29934400-29935800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
44 chr6:29934400-29935800 Enhancers Primary T helper cells fromperipheralblood blood
45 chr6:29934400-29936000 Enhancers Primary T helper cells PMA-I stimulated --
46 chr6:29934400-29936000 Enhancers Fetal Thymus thymus
47 chr6:29934400-29936200 Enhancers Primary T regulatory cells fromperipheralblood blood
48 chr6:29934400-29936400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr6:29934400-29936400 Enhancers HUES48 Cell Line embryonic stem cell
50 chr6:29934400-29936600 Enhancers ES-I3 Cell Line embryonic stem cell

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