Variant report
| Variant | rs17199988 |
|---|---|
| Chromosome Location | chr10:61557622-61557623 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:61537600-61582800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 2 | chr10:61540200-61562800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr10:61545200-61563200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 4 | chr10:61545800-61563200 | Weak transcription | Spleen | Spleen |
| 5 | chr10:61548200-61563200 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 6 | chr10:61548600-61573000 | Strong transcription | Dnd41 | blood |
| 7 | chr10:61549600-61558400 | Strong transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 8 | chr10:61549600-61572000 | Strong transcription | Liver | Liver |
| 9 | chr10:61549600-61579600 | Strong transcription | Primary B cells from cord blood | blood |
| 10 | chr10:61549800-61567400 | Weak transcription | Fetal Heart | heart |
| 11 | chr10:61549800-61569000 | Strong transcription | Duodenum Mucosa | Duodenum |
| 12 | chr10:61550200-61558200 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 13 | chr10:61550200-61559600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 14 | chr10:61550200-61561800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 15 | chr10:61550400-61566600 | Weak transcription | Fetal Brain Male | brain |
| 16 | chr10:61550400-61568800 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 17 | chr10:61550400-61569400 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 18 | chr10:61550800-61564000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 19 | chr10:61551400-61561800 | Strong transcription | Primary hematopoietic stem cells | blood |
| 20 | chr10:61551800-61563200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 21 | chr10:61553000-61559400 | Weak transcription | Psoas Muscle | Psoas |
| 22 | chr10:61553000-61562800 | Weak transcription | Gastric | stomach |
| 23 | chr10:61553000-61563000 | Weak transcription | Colon Smooth Muscle | Colon |
| 24 | chr10:61553000-61563400 | Weak transcription | Colonic Mucosa | Colon |
| 25 | chr10:61553000-61564400 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 26 | chr10:61553000-61571000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 27 | chr10:61553200-61563400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 28 | chr10:61553200-61563600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 29 | chr10:61553200-61564200 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 30 | chr10:61553400-61562800 | Weak transcription | Lung | lung |
| 31 | chr10:61553400-61563200 | Weak transcription | Brain Cingulate Gyrus | brain |
| 32 | chr10:61553400-61563200 | Weak transcription | Brain Germinal Matrix | brain |
| 33 | chr10:61553400-61563200 | Weak transcription | Right Ventricle | heart |
| 34 | chr10:61553800-61559000 | Weak transcription | Fetal Stomach | stomach |
| 35 | chr10:61554200-61561200 | Weak transcription | HepG2 | liver |
| 36 | chr10:61554200-61563200 | Weak transcription | Hela-S3 | cervix |
| 37 | chr10:61554200-61563400 | Weak transcription | HUVEC | blood vessel |
| 38 | chr10:61554400-61558200 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 39 | chr10:61554400-61559200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 40 | chr10:61554400-61559200 | Weak transcription | Pancreas | Pancrea |
| 41 | chr10:61554400-61559200 | Weak transcription | NHDF-Ad | bronchial |
| 42 | chr10:61554400-61561000 | Weak transcription | Fetal Lung | lung |
| 43 | chr10:61554400-61561000 | Weak transcription | Ovary | ovary |
| 44 | chr10:61554400-61562200 | Weak transcription | A549 | lung |
| 45 | chr10:61554400-61562800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 46 | chr10:61554400-61562800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 47 | chr10:61554400-61562800 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 48 | chr10:61554400-61562800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 49 | chr10:61554400-61562800 | Weak transcription | Aorta | Aorta |
| 50 | chr10:61554400-61562800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
