The 2.0 version of rSNPBase

Variant report

Variant rs17221716
Chromosome Location chr6:33312526-33312527
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:33291800-33317400 Weak transcription Right Atrium heart
2 chr6:33311200-33314000 Enhancers Fetal Thymus thymus
3 chr6:33311400-33312600 Enhancers Dnd41 blood
4 chr6:33311400-33312800 Enhancers Lung lung
5 chr6:33311400-33313200 Flanking Active TSS Primary T cells from cord blood blood
6 chr6:33311400-33313200 Enhancers Spleen Spleen
7 chr6:33311400-33313200 Flanking Active TSS GM12878-XiMat blood
8 chr6:33311400-33313400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
9 chr6:33311600-33313200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
10 chr6:33311600-33313200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
11 chr6:33311600-33313400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
12 chr6:33311600-33313600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr6:33311800-33313200 Flanking Active TSS Primary B cells from cord blood blood
14 chr6:33311800-33313200 Flanking Active TSS Primary T cells fromperipheralblood blood
15 chr6:33311800-33313200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
16 chr6:33312000-33313000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:33312000-33313200 Flanking Active TSS Primary B cells from peripheral blood blood
18 chr6:33312000-33313200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
19 chr6:33312000-33313200 Enhancers Primary mononuclear cells fromperipheralblood Blood
20 chr6:33312000-33313200 Flanking Active TSS Thymus Thymus
21 chr6:33312000-33313400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
22 chr6:33312200-33312600 Enhancers Primary hematopoietic stem cells blood
23 chr6:33312200-33312600 Enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr6:33312200-33312600 Enhancers Primary Natural Killer cells fromperipheralblood blood
25 chr6:33312200-33312600 Enhancers Colonic Mucosa Colon
26 chr6:33312200-33312600 Enhancers K562 blood
27 chr6:33312200-33312800 Enhancers Rectal Mucosa Donor 31 rectum
28 chr6:33312200-33313000 Enhancers Sigmoid Colon Sigmoid Colon
29 chr6:33312200-33313200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr6:33312200-33313200 Enhancers HMEC breast
31 chr6:33312200-33313400 Active TSS Rectal Smooth Muscle rectum
32 chr6:33312400-33312600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr6:33312400-33312600 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr6:33312400-33312600 Enhancers Primary T killer memory cells from peripheral blood blood
35 chr6:33312400-33312600 Active TSS Rectal Mucosa Donor 29 rectum
36 chr6:33312400-33312600 Enhancers Monocytes-CD14+_RO01746 blood
37 chr6:33312400-33312800 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
38 chr6:33312400-33312800 Enhancers Duodenum Mucosa Duodenum
39 chr6:33312400-33313000 Enhancers Colon Smooth Muscle Colon
40 chr6:33312400-33313600 Enhancers Primary monocytes fromperipheralblood blood
41 chr6:33312400-33313800 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015