Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11917333	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11922083	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs13058777	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs13064390	0.87[EUR][1000 genomes]
rs13065193	0.87[EUR][1000 genomes]
rs13065887	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs13077690	0.87[EUR][1000 genomes]
rs13091322	0.81[EUR][1000 genomes]
rs1452220	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1452222	0.80[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1485672	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35110829	0.81[EUR][1000 genomes]
rs4974124	0.92[AFR][1000 genomes];0.83[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs4974127	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4974128	0.88[EUR][1000 genomes]
rs4974169	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs4974182	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs56135751	0.82[AFR][1000 genomes]
rs755322	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7626886	0.89[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs7627149	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9830173	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009709	chr3:56000827-56294945	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56168800-56182400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr3:56180600-56181600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr3:56180800-56181600	Enhancers	Fetal Kidney	kidney

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