Variant report

Variant	rs56135751
Chromosome Location	chr3:56299694-56299695
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 58 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:58)

rs_ID	r²[population]
rs11130508	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11130509	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11130510	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11130512	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11130513	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11130515	0.86[ASN][1000 genomes]
rs11708280	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11710376	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11710542	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11712446	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11715860	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11919266	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11922083	0.82[EUR][1000 genomes]
rs11922800	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13061518	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13064390	0.81[EUR][1000 genomes]
rs13065193	0.81[EUR][1000 genomes]
rs13065887	0.86[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs13076397	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13077690	0.90[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs13085545	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13093276	0.86[ASN][1000 genomes]
rs13096861	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1452220	0.83[AFR][1000 genomes]
rs1485672	0.82[AFR][1000 genomes]
rs17235410	0.82[AFR][1000 genomes]
rs17825379	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2123181	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34392996	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34502592	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34699897	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34713833	0.84[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34715192	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34718158	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34770968	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35110829	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35215252	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35659930	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs36044157	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4325896	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4974124	0.89[AFR][1000 genomes]
rs4974127	0.82[EUR][1000 genomes]
rs4974128	0.83[AFR][1000 genomes];0.82[EUR][1000 genomes]
rs4974134	0.86[ASN][1000 genomes]
rs4974182	0.86[AFR][1000 genomes]
rs4974193	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4974197	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62253617	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs62253627	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs62255872	0.86[ASN][1000 genomes]
rs6765986	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6790858	0.86[ASN][1000 genomes]
rs6791227	0.86[ASN][1000 genomes]
rs755322	0.89[AFR][1000 genomes]
rs7626886	0.93[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs7627149	0.80[EUR][1000 genomes]
rs7637946	0.86[ASN][1000 genomes]
rs9799155	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56288800-56311400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr3:56290200-56303200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr3:56299400-56303200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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