Variant report

Variant	rs11130512
Chromosome Location	chr3:56348706-56348707
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:64)

rs_ID	r²[population]
rs11130508	0.81[AMR][1000 genomes]
rs11130509	0.81[AMR][1000 genomes]
rs11130510	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11130513	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11130515	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11708280	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11708654	0.80[ASN][1000 genomes]
rs11710376	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11710542	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11711109	0.80[ASN][1000 genomes]
rs11711928	0.83[ASN][1000 genomes]
rs11712446	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11715860	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11718664	0.88[ASN][1000 genomes]
rs11919266	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11922800	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11929325	0.83[ASN][1000 genomes]
rs13061518	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13076397	0.81[AMR][1000 genomes]
rs13085545	0.81[AMR][1000 genomes]
rs13093276	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13096861	0.81[AMR][1000 genomes]
rs17825379	0.82[AMR][1000 genomes]
rs1947348	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2123181	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs34018952	0.83[ASN][1000 genomes]
rs34392996	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34502592	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34699897	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34713833	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs34715192	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34718158	0.82[AMR][1000 genomes]
rs34770968	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs34825657	0.83[ASN][1000 genomes]
rs34967455	0.83[ASN][1000 genomes]
rs35110829	0.81[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35215252	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35659930	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35947588	0.81[ASN][1000 genomes]
rs36044157	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4325896	0.82[AMR][1000 genomes]
rs4974134	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4974138	0.80[ASN][1000 genomes]
rs4974139	0.80[ASN][1000 genomes]
rs4974193	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4974197	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4974200	0.88[ASN][1000 genomes]
rs4974211	0.80[ASN][1000 genomes]
rs4974212	0.80[ASN][1000 genomes]
rs56135751	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs60814962	0.80[ASN][1000 genomes]
rs62253617	0.82[AMR][1000 genomes]
rs62253627	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62255872	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6765986	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6790858	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6791227	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs755322	0.86[CEU][hapmap]
rs7610959	0.88[ASN][1000 genomes]
rs7637430	0.80[ASN][1000 genomes]
rs7637946	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7641157	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7641435	0.80[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9799155	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:56343800-56348800	Weak transcription	Fetal Heart	heart
2	chr3:56344000-56357400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr3:56345000-56349000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr3:56347400-56349000	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr3:56347600-56349200	Enhancers	Psoas Muscle	Psoas
6	chr3:56347600-56350200	Enhancers	HSMMtube	muscle
7	chr3:56348000-56349400	Enhancers	Fetal Muscle Leg	muscle
8	chr3:56348200-56349000	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr3:56348200-56349000	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr3:56348200-56349000	Enhancers	HSMM	muscle
11	chr3:56348600-56349600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr3:56348600-56349800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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