Variant report

Variant rs17350996
Chromosome Location chr13:48685236-48685237
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48669800-48685400 Weak transcription Brain Inferior Temporal Lobe brain
2 chr13:48683400-48687800 Enhancers Breast Myoepithelial Primary Cells Breast
3 chr13:48683600-48686000 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr13:48683800-48685600 Enhancers Liver Liver
5 chr13:48683800-48685800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr13:48683800-48685800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr13:48683800-48686400 Enhancers Brain Anterior Caudate brain
8 chr13:48683800-48686400 Enhancers Hela-S3 cervix
9 chr13:48684000-48685400 Enhancers Muscle Satellite Cultured Cells --
10 chr13:48684000-48686600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr13:48684400-48686000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr13:48684400-48686200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
13 chr13:48684600-48685400 Enhancers Duodenum Mucosa Duodenum
14 chr13:48684600-48685800 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr13:48684600-48686000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr13:48684600-48686000 Enhancers HUES6 Cell Line embryonic stem cell
17 chr13:48684600-48686000 Enhancers HMEC breast
18 chr13:48684600-48686200 Enhancers Brain Substantia Nigra brain
19 chr13:48684600-48686400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr13:48684600-48686400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr13:48684600-48686400 Enhancers Cortex derived primary cultured neurospheres brain
22 chr13:48684800-48685800 Enhancers NH-A brain
23 chr13:48685000-48685800 Enhancers Osteobl bone
24 chr13:48685000-48686200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr13:48685000-48686400 Enhancers Small Intestine intestine
26 chr13:48685000-48688800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr13:48685000-48689000 Enhancers Adipose Nuclei Adipose
28 chr13:48685000-48689200 Enhancers HepG2 liver
29 chr13:48685200-48685400 Enhancers Placenta Placenta
30 chr13:48685200-48685400 Flanking Active TSS HUVEC blood vessel
31 chr13:48685200-48685800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
32 chr13:48685200-48685800 Enhancers Colon Smooth Muscle Colon
33 chr13:48685200-48685800 Enhancers Ovary ovary
34 chr13:48685200-48685800 Enhancers Psoas Muscle Psoas
35 chr13:48685200-48686000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr13:48685200-48686200 Enhancers Brain Angular Gyrus brain
37 chr13:48685200-48686200 Enhancers Stomach Smooth Muscle stomach
38 chr13:48685200-48686400 Enhancers Brain Cingulate Gyrus brain
39 chr13:48685200-48686400 Enhancers Brain Hippocampus Middle brain
40 chr13:48685200-48686400 Enhancers Duodenum Smooth Muscle Duodenum
41 chr13:48685200-48687200 Enhancers Left Ventricle heart
42 chr13:48685200-48687200 Enhancers Right Atrium heart

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