The 2.0 version of rSNPBase

Variant report

Variant rs9568009
Chromosome Location chr13:48698856-48698857
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:48686600-48700000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr13:48695800-48699600 Weak transcription HUVEC blood vessel
3 chr13:48695800-48700000 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr13:48695800-48701200 Weak transcription Fetal Intestine Small intestine
5 chr13:48696000-48699600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr13:48696200-48699800 Weak transcription Fetal Kidney kidney
7 chr13:48696200-48701200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr13:48696200-48701200 Weak transcription Duodenum Mucosa Duodenum
9 chr13:48696400-48699800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr13:48696400-48699800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr13:48697400-48701400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr13:48697800-48699000 Enhancers Colon Smooth Muscle Colon
13 chr13:48697800-48699200 Enhancers Stomach Smooth Muscle stomach
14 chr13:48697800-48699800 Enhancers HepG2 liver
15 chr13:48697800-48702200 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr13:48698000-48699000 Enhancers Esophagus oesophagus
17 chr13:48698000-48699200 Enhancers Right Atrium heart
18 chr13:48698000-48700000 Enhancers Lung lung
19 chr13:48698000-48700600 Enhancers Fetal Adrenal Gland Adrenal Gland
20 chr13:48698000-48700800 Enhancers Left Ventricle heart
21 chr13:48698200-48699600 Weak transcription Aorta Aorta
22 chr13:48698400-48699000 Enhancers Spleen Spleen
23 chr13:48698400-48699800 Enhancers Skeletal Muscle Male skeletal muscle
24 chr13:48698400-48700000 Enhancers Adipose Nuclei Adipose
25 chr13:48698400-48700000 Weak transcription Fetal Muscle Trunk muscle
26 chr13:48698600-48699600 Weak transcription Fetal Stomach stomach
27 chr13:48698600-48699600 Weak transcription Rectal Smooth Muscle rectum
28 chr13:48698600-48699600 Weak transcription HSMMtube muscle
29 chr13:48698600-48699800 Weak transcription Fetal Muscle Leg muscle
30 chr13:48698600-48700000 Weak transcription HMEC breast
31 chr13:48698600-48701200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr13:48698600-48701200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr13:48698600-48701400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr13:48698600-48701400 Weak transcription Small Intestine intestine
35 chr13:48698800-48699600 Weak transcription Ovary ovary
36 chr13:48698800-48699800 Weak transcription Brain Hippocampus Middle brain
37 chr13:48698800-48699800 Weak transcription Fetal Lung lung
38 chr13:48698800-48699800 Weak transcription Stomach Mucosa stomach
39 chr13:48698800-48700000 Weak transcription Gastric stomach
40 chr13:48698800-48700000 Weak transcription Right Ventricle heart
41 chr13:48698800-48701200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:48698800-48701200 Weak transcription NHEK skin
43 chr13:48698800-48701400 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015