Variant report

Variant	rs17369945
Chromosome Location	chr1:179674156-179674157
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10798711	0.82[EUR][1000 genomes]
rs11582158	0.81[JPT][hapmap]
rs12724901	0.81[JPT][hapmap]
rs12747675	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12751914	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs35229401	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35448215	0.97[ASN][1000 genomes]
rs3765548	0.88[JPT][hapmap];0.81[ASN][1000 genomes]
rs4652426	0.87[ASN][1000 genomes]
rs4652428	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs4652430	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs61826402	0.87[ASN][1000 genomes]
rs61826427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179670000-179674200	Enhancers	Stomach Mucosa	stomach
2	chr1:179673400-179674400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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