Variant report
Variant | rs4652426 |
---|---|
Chromosome Location | chr1:179575345-179575346 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:179567719..179570600-chr1:179574245..179576167,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10753200 | 0.91[EUR][1000 genomes] |
rs12403885 | 0.92[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs12406197 | 0.91[EUR][1000 genomes] |
rs12736279 | 0.87[EUR][1000 genomes] |
rs12736545 | 0.87[EUR][1000 genomes] |
rs12747675 | 1.00[AFR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs1328597 | 0.89[EUR][1000 genomes] |
rs1328598 | 0.89[EUR][1000 genomes] |
rs1410589 | 0.88[EUR][1000 genomes] |
rs1590783 | 0.90[EUR][1000 genomes] |
rs17369945 | 0.87[ASN][1000 genomes] |
rs1887815 | 0.92[EUR][1000 genomes] |
rs2209919 | 0.88[EUR][1000 genomes] |
rs35229401 | 0.83[AFR][1000 genomes];0.83[ASN][1000 genomes] |
rs35427395 | 0.89[EUR][1000 genomes] |
rs35448215 | 0.88[AFR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs36057553 | 0.92[EUR][1000 genomes];0.84[ASN][1000 genomes] |
rs3754133 | 0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs3765548 | 0.83[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs3930537 | 0.95[EUR][1000 genomes] |
rs4652418 | 0.89[EUR][1000 genomes] |
rs4652424 | 0.90[EUR][1000 genomes] |
rs61826364 | 0.89[EUR][1000 genomes] |
rs61826365 | 0.89[EUR][1000 genomes] |
rs61826402 | 1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs61826427 | 0.87[ASN][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:179575200-179575800 | Active TSS | K562 | blood |