Variant report
| Variant | rs1590783 |
|---|---|
| Chromosome Location | chr1:179568264-179568265 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000162782 | Chromatin interaction |
| ENSG00000261060 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:18)
| rs_ID | r2[population] |
|---|---|
| rs10157699 | 0.88[AFR][1000 genomes];0.88[ASN][1000 genomes] |
| rs10753200 | 0.90[EUR][1000 genomes] |
| rs12403885 | 0.83[EUR][1000 genomes] |
| rs12406197 | 0.81[EUR][1000 genomes] |
| rs1328597 | 0.80[EUR][1000 genomes] |
| rs1328598 | 0.80[EUR][1000 genomes] |
| rs1887815 | 0.89[EUR][1000 genomes] |
| rs35427395 | 0.80[EUR][1000 genomes] |
| rs36057553 | 0.83[EUR][1000 genomes] |
| rs3930537 | 0.93[EUR][1000 genomes] |
| rs4628468 | 0.85[AFR][1000 genomes];0.88[ASN][1000 genomes] |
| rs4652418 | 0.92[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs4652420 | 0.91[ASN][1000 genomes] |
| rs4652424 | 0.89[EUR][1000 genomes] |
| rs4652426 | 0.90[EUR][1000 genomes] |
| rs61826364 | 0.80[EUR][1000 genomes] |
| rs61826365 | 0.80[EUR][1000 genomes] |
| rs61826402 | 0.90[EUR][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
