The 2.0 version of rSNPBase

Variant report

Variant rs17374295
Chromosome Location chr2:173862650-173862651
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173835800-173886800 Weak transcription Lung lung
2 chr2:173850400-173864600 Weak transcription Psoas Muscle Psoas
3 chr2:173852400-173868000 Weak transcription Gastric stomach
4 chr2:173855800-173863400 Weak transcription Brain Cingulate Gyrus brain
5 chr2:173856000-173885200 Weak transcription Brain Anterior Caudate brain
6 chr2:173856200-173863600 Weak transcription Brain Germinal Matrix brain
7 chr2:173856200-173882400 Weak transcription Left Ventricle heart
8 chr2:173856200-173892600 Weak transcription Brain Angular Gyrus brain
9 chr2:173858400-173869000 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr2:173859200-173863200 Weak transcription Placenta Placenta
11 chr2:173860200-173863800 Enhancers HMEC breast
12 chr2:173860200-173864400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:173860600-173868000 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr2:173860800-173877800 Weak transcription Adipose Nuclei Adipose
15 chr2:173861000-173862800 Weak transcription Fetal Heart heart
16 chr2:173861000-173867400 Weak transcription Stomach Mucosa stomach
17 chr2:173861000-173888000 Weak transcription Fetal Stomach stomach
18 chr2:173861200-173866800 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr2:173861200-173867400 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr2:173861400-173863600 Weak transcription Fetal Lung lung
21 chr2:173861400-173867800 Strong transcription Liver Liver
22 chr2:173861600-173863400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:173861600-173866800 Weak transcription Fetal Kidney kidney
24 chr2:173861600-173867600 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr2:173861800-173863000 Weak transcription Hela-S3 cervix
26 chr2:173861800-173863200 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:173861800-173864800 Enhancers A549 lung
28 chr2:173861800-173868000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr2:173862000-173862800 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr2:173862000-173863200 Weak transcription NHEK skin
31 chr2:173862000-173863400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr2:173862000-173864200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr2:173862000-173865200 Weak transcription Ovary ovary
34 chr2:173862200-173867000 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr2:173862200-173881800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr2:173862200-173883600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr2:173862400-173862800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr2:173862400-173870600 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr2:173862600-173862800 Enhancers Small Intestine intestine
40 chr2:173862600-173863200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:173862600-173863400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr2:173862600-173863800 Enhancers Skeletal Muscle Female skeletal muscle
43 chr2:173862600-173864800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015