Variant report
| Variant | rs17406943 |
|---|---|
| Chromosome Location | chr1:56918398-56918399 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:56905400-56942600 | Weak transcription | Gastric | stomach |
| 2 | chr1:56912800-56918600 | Weak transcription | Fetal Heart | heart |
| 3 | chr1:56912800-56922400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 4 | chr1:56912800-56923400 | Weak transcription | Spleen | Spleen |
| 5 | chr1:56913800-56943200 | Weak transcription | Aorta | Aorta |
| 6 | chr1:56914200-56919800 | Enhancers | Fetal Intestine Small | intestine |
| 7 | chr1:56914400-56919600 | Enhancers | Fetal Intestine Large | intestine |
| 8 | chr1:56914600-56919800 | Enhancers | H1 Cell Line | embryonic stem cell |
| 9 | chr1:56915000-56922400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 10 | chr1:56915200-56922400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 11 | chr1:56915200-56935800 | Weak transcription | NHLF | lung |
| 12 | chr1:56915400-56918800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 13 | chr1:56915600-56919000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 14 | chr1:56915800-56918400 | Enhancers | Brain Substantia Nigra | brain |
| 15 | chr1:56915800-56919800 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 16 | chr1:56916000-56918600 | Enhancers | Stomach Mucosa | stomach |
| 17 | chr1:56916000-56919600 | Enhancers | Stomach Smooth Muscle | stomach |
| 18 | chr1:56916200-56918400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 19 | chr1:56916200-56918400 | Weak transcription | Psoas Muscle | Psoas |
| 20 | chr1:56916200-56918400 | Weak transcription | Right Ventricle | heart |
| 21 | chr1:56916200-56919200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 22 | chr1:56916200-56919600 | Enhancers | HepG2 | liver |
| 23 | chr1:56916200-56922200 | Weak transcription | Lung | lung |
| 24 | chr1:56916400-56921200 | Weak transcription | Hela-S3 | cervix |
| 25 | chr1:56916600-56919000 | Enhancers | Colonic Mucosa | Colon |
| 26 | chr1:56916600-56920200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 27 | chr1:56916800-56918400 | Enhancers | Brain Angular Gyrus | brain |
| 28 | chr1:56916800-56918600 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 29 | chr1:56916800-56918800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 30 | chr1:56916800-56918800 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr1:56916800-56919000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 32 | chr1:56916800-56919000 | Enhancers | Brain Hippocampus Middle | brain |
| 33 | chr1:56916800-56919200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 34 | chr1:56916800-56919600 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 35 | chr1:56916800-56920600 | Enhancers | H9 Cell Line | embryonic stem cell |
| 36 | chr1:56917000-56918400 | Enhancers | Brain Cingulate Gyrus | brain |
| 37 | chr1:56917000-56918600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 38 | chr1:56917000-56919000 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 39 | chr1:56917000-56919200 | Enhancers | Adipose Nuclei | Adipose |
| 40 | chr1:56917000-56919600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 41 | chr1:56917000-56919600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 42 | chr1:56917000-56919600 | Enhancers | Fetal Muscle Leg | muscle |
| 43 | chr1:56917000-56919600 | Enhancers | Left Ventricle | heart |
| 44 | chr1:56917000-56919600 | Enhancers | Right Atrium | heart |
| 45 | chr1:56917200-56918400 | Enhancers | Rectal Mucosa Donor 29 | rectum |
| 46 | chr1:56917200-56918600 | Enhancers | Fetal Thymus | thymus |
| 47 | chr1:56917200-56918800 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 48 | chr1:56917200-56919000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 49 | chr1:56917200-56919400 | Enhancers | Fetal Lung | lung |
| 50 | chr1:56917200-56919800 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
