Variant report
| Variant | rs17489597 |
|---|---|
| Chromosome Location | chr12:40485977-40485978 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:40453800-40487400 | Weak transcription | Left Ventricle | heart |
| 2 | chr12:40464400-40493200 | Weak transcription | Colon Smooth Muscle | Colon |
| 3 | chr12:40466400-40498200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 4 | chr12:40471400-40496800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 5 | chr12:40474400-40497000 | Weak transcription | Ovary | ovary |
| 6 | chr12:40475400-40497200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 7 | chr12:40475600-40496400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 8 | chr12:40476400-40486200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 9 | chr12:40476400-40492400 | Weak transcription | K562 | blood |
| 10 | chr12:40476400-40497400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 11 | chr12:40476600-40492600 | Weak transcription | Lung | lung |
| 12 | chr12:40476600-40498400 | Weak transcription | Fetal Stomach | stomach |
| 13 | chr12:40476800-40497800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 14 | chr12:40477000-40492000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 15 | chr12:40477000-40497000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 16 | chr12:40477200-40495200 | Weak transcription | Hela-S3 | cervix |
| 17 | chr12:40477400-40496800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 18 | chr12:40478600-40492600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 19 | chr12:40479000-40493400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 20 | chr12:40479200-40493200 | Weak transcription | Fetal Heart | heart |
| 21 | chr12:40480200-40493400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 22 | chr12:40480600-40496800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 23 | chr12:40481200-40492800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 24 | chr12:40482000-40497800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 25 | chr12:40482400-40493400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 26 | chr12:40485000-40486200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 27 | chr12:40485000-40492600 | Weak transcription | Fetal Intestine Large | intestine |
| 28 | chr12:40485400-40487000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 29 | chr12:40485600-40496800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 30 | chr12:40485800-40487800 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
