Variant report
| Variant | rs28370796 |
|---|---|
| Chromosome Location | chr12:40426188-40426189 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:40394400-40448400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 2 | chr12:40405400-40445200 | Weak transcription | K562 | blood |
| 3 | chr12:40411400-40428200 | Weak transcription | Colon Smooth Muscle | Colon |
| 4 | chr12:40411400-40428600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 5 | chr12:40411600-40426200 | Weak transcription | Esophagus | oesophagus |
| 6 | chr12:40411800-40426400 | Weak transcription | Right Ventricle | heart |
| 7 | chr12:40416600-40441800 | Weak transcription | Ovary | ovary |
| 8 | chr12:40417000-40426400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr12:40419000-40428600 | Weak transcription | Aorta | Aorta |
| 10 | chr12:40419000-40447600 | Weak transcription | Hela-S3 | cervix |
| 11 | chr12:40421600-40427000 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr12:40421600-40428000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 13 | chr12:40421600-40453400 | Weak transcription | Left Ventricle | heart |
| 14 | chr12:40421800-40427800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 15 | chr12:40425200-40428000 | Enhancers | Fetal Intestine Small | intestine |
| 16 | chr12:40425200-40429000 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 17 | chr12:40425400-40426600 | Enhancers | HUES48 Cell Line | embryonic stem cell |
| 18 | chr12:40425400-40428400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 19 | chr12:40425400-40429200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 20 | chr12:40425600-40426200 | Enhancers | Stomach Mucosa | stomach |
| 21 | chr12:40425600-40426400 | Enhancers | Fetal Intestine Large | intestine |
| 22 | chr12:40425600-40426800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 23 | chr12:40425600-40427400 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 24 | chr12:40425600-40429000 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 25 | chr12:40425600-40429800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 26 | chr12:40425800-40426200 | Flanking Active TSS | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 27 | chr12:40425800-40426200 | Active TSS | Pancreatic Islets | Pancreatic Islet |
| 28 | chr12:40425800-40426400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 29 | chr12:40425800-40426400 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 30 | chr12:40426000-40426200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
| 31 | chr12:40426000-40426200 | Active TSS | Duodenum Mucosa | Duodenum |
| 32 | chr12:40426000-40426400 | Flanking Active TSS | Liver | Liver |
| 33 | chr12:40426000-40426600 | Enhancers | Duodenum Smooth Muscle | Duodenum |
| 34 | chr12:40426000-40426600 | Enhancers | Fetal Kidney | kidney |
| 35 | chr12:40426000-40426800 | Enhancers | Fetal Lung | lung |
| 36 | chr12:40426000-40427000 | Enhancers | H9 Cell Line | embryonic stem cell |
| 37 | chr12:40426000-40427200 | Enhancers | Placenta Amnion | Placenta Amnion |
| 38 | chr12:40426000-40427400 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 39 | chr12:40426000-40427400 | Enhancers | Pancreas | Pancrea |
| 40 | chr12:40426000-40428200 | Enhancers | H1 Cell Line | embryonic stem cell |
| 41 | chr12:40426000-40428800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 42 | chr12:40426000-40429000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
