Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs1035609	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10447880	1.00[CHB][hapmap]
rs10954567	1.00[CHB][hapmap]
rs12537962	1.00[CHB][hapmap]
rs12540313	1.00[CHB][hapmap]
rs13244595	1.00[CHB][hapmap]
rs1364406	1.00[CHB][hapmap]
rs1424543	1.00[CHB][hapmap]
rs1424574	1.00[CHB][hapmap]
rs17414604	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17494846	1.00[CHB][hapmap]
rs17495182	1.00[CHB][hapmap]
rs324637	1.00[JPT][hapmap]
rs324640	1.00[JPT][hapmap]
rs324644	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs420817	1.00[JPT][hapmap]
rs4341110	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62487065	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs62487067	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs6963577	1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7357341	1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7458912	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv831147	chr7:136583444-136755741	Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
3	esv2753059	chr7:136633745-136893745	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136674800-136694200	Weak transcription	Left Ventricle	heart
2	chr7:136687600-136694400	Enhancers	Fetal Heart	heart
3	chr7:136690600-136692600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr7:136690600-136692600	Enhancers	NHLF	lung
5	chr7:136691000-136692600	Enhancers	Osteobl	bone
6	chr7:136691000-136692800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr7:136691000-136692800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr7:136691400-136692600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr7:136691400-136692800	Enhancers	Pancreatic Islets	Pancreatic Islet
10	chr7:136691800-136699800	Weak transcription	Fetal Stomach	stomach
11	chr7:136692000-136692600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr7:136692000-136693400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr7:136692000-136695200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr7:136692200-136692600	Enhancers	Ovary	ovary
15	chr7:136692200-136699800	Weak transcription	Colon Smooth Muscle	Colon
16	chr7:136692200-136699800	Weak transcription	Stomach Smooth Muscle	stomach

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